RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
HDAC9-208ENST00000417496 IGHV3OR16-8A0A075B7F1 116 aa11.4□□□□□ -0.58
HDAC9-208ENST00000417496 HTR1DP28221 377 aa11.4□□□□□ -0.58
HDAC9-208ENST00000417496 VKORC1Q9BQB6 163 aa11.4□□□□□ -0.58
HDAC9-208ENST00000417496 SCNM1Q9BWG6 230 aa11.4□□□□□ -0.58
HDAC9-208ENST00000417496 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.59
HDAC9-208ENST00000417496 NBR2O15453 112 aa11.4□□□□□ -0.59
HDAC9-208ENST00000417496 TCF21O43680 179 aa11.4□□□□□ -0.59
HDAC9-208ENST00000417496 HOXB4P17483 251 aaPredicted RBP11.4□□□□□ -0.59
HDAC9-208ENST00000417496 PAX2Q02962 417 aa11.4□□□□□ -0.59
HDAC9-208ENST00000417496 PSG8Q9UQ74 426 aa11.4□□□□□ -0.59
HDAC9-208ENST00000417496 SOX21Q9Y651 276 aaPredicted RBP11.4□□□□□ -0.59
HDAC9-208ENST00000417496 H3BRN7 92 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 HAX1O00165 279 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 HLA-DRB1P01911 266 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 LIPFP07098 398 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 ZNF414Q96IQ9 312 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 NDFIP1Q9BT67 221 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 DPM3Q9P2X0 92 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 A0A1B0GUT8 65 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 ERASQ7Z444 233 aa11.39□□□□□ -0.59
HDAC9-208ENST00000417496 IGHV3-35A0A0C4DH35 117 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 GNG7O60262 68 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 PSG3Q16557 428 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 IGFL4Q6B9Z1 124 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 CFHR4Q92496 578 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 CHCHD1Q96BP2 118 aaKnown RBP11.38□□□□□ -0.59
HDAC9-208ENST00000417496 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
HDAC9-208ENST00000417496 NCBP2LA6PVI3 153 aaKnown RBP11.38□□□□□ -0.59
HDAC9-208ENST00000417496 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-208ENST00000417496 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 NDPQ00604 133 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
HDAC9-208ENST00000417496 FAM231BA6NCW3 169 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 MRPS12O15235 138 aaKnown RBP11.37□□□□□ -0.59
HDAC9-208ENST00000417496 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 DYNAPQ8N1N2 210 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 NEU4Q8WWR8 484 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-208ENST00000417496 FANCD2OSQ96PS1 177 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 CELSR1Q9NYQ6 3014 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
HDAC9-208ENST00000417496 COL12A1Q99715 3063 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 IGKV2-40A0A087WW87 121 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-208ENST00000417496 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-208ENST00000417496 K7ENP7 123 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 CCL25O15444 150 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 IGKV2D-40P01614 121 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-208ENST00000417496 FXYD7P58549 80 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 MPV17L2Q567V2 206 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 RNF5Q99942 180 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 C1RLQ9NZP8 487 aa11.36□□□□□ -0.59
HDAC9-208ENST00000417496 LOC389332A0A1B0GUA5 103 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 TMEM213A2RRL7 107 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 OR2T8A6NH00 312 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 CCL21O00585 134 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 C5orf64Q2M2E5 130 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 K7EQM0 130 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
HDAC9-208ENST00000417496 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
HDAC9-208ENST00000417496 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 Q8TAT8 98 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 LOC105371242A0A075B767 164 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 SNAI2O43623 268 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 NCR2O95944 276 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 HLA-DMBP28068 263 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 RIGQ13278 110 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 FOXE3Q13461 319 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 LYZL1Q6UWQ5 148 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
HDAC9-208ENST00000417496 VPS13CQ709C8 3753 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 IGLV11-55A0A075B6I3 123 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 C20orf202A1L168 122 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 NDUFA3O95167 84 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 OR5AL1P0C617 328 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 IFI27P40305 119 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-208ENST00000417496 NPBQ8NG41 125 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 PRSS3P2Q8NHM4 247 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 NUDT3O95989 172 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 TCTAP57738 103 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
HDAC9-208ENST00000417496 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
HDAC9-208ENST00000417496 D6R8Y8 96 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 NBL1P41271 181 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 MFAP4P55083 255 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 TMEM191AQ9H0A3 160 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 SPTAN1Q13813 2472 aaKnown RBP11.32□□□□□ -0.6
HDAC9-208ENST00000417496 MAP1AP78559 2803 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-208ENST00000417496 TRBV6-1A0A0K0K1D8 114 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 CEACAM3P40198 252 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 LYPD1Q8N2G4 141 aa11.32□□□□□ -0.6
HDAC9-208ENST00000417496 RAB1BQ9H0U4 201 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms