RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 SLC17A3O00476 420 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 IGHV4-31P0DP07 118 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 HNF1AP20823 631 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 IER3P46695 156 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 S100A12P80511 92 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 Q5PR19 223 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 FAM162BQ5T6X4 162 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 TMEM86BQ8N661 226 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 PACRGQ96M98 296 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 CCDC140Q96MF4 163 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 NDFIP1Q9BT67 221 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 RNASE7Q9H1E1 156 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 GNB4Q9HAV0 340 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 PSG8Q9UQ74 426 aa8.57□□□□□ -1.04
TRAPPC12-205ENST00000416918 FAM208BQ5VWN6 2430 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 UBR5O95071 2799 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 TRAV34A0A0B4J273 112 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 K7EMT4 169 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 ARL3P36405 182 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 TPPP2P59282 170 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 RPS20P60866 119 aaKnown RBP8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 GNG5P63218 68 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 SLC35B1P78383 322 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 HIST3H2BBQ8N257 126 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 GBGT1Q8N5D6 347 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 NPFFR1Q9GZQ6 430 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 VPREB3Q9UKI3 123 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 FLNCQ14315 2725 aa8.56□□□□□ -1.04
TRAPPC12-205ENST00000416918 LRRK2Q5S007 2527 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 AVPP01185 164 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 IGLV2-11P01706 119 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 IGHG4P01861 327 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 COL8A1P27658 744 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 SRSF2Q01130 221 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 Q0VG73 95 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 SCGB2A2Q13296 93 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 LY6EQ16553 131 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 DEFB112Q30KQ8 113 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 FAM106AQ4KMX7 169 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 Q6YL49 198 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 RBPMS2Q6ZRY4 209 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 EXOC3-AS1Q8N2X6 119 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 MS4A10Q96PG2 267 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 MRPL18Q9H0U6 180 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 PPP1R14DQ9NXH3 145 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 S4R3C0 116 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 EPG5Q9HCE0 2579 aa8.55□□□□□ -1.04
TRAPPC12-205ENST00000416918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.54□□□□□ -1.043e-27■■■■■ 41.6
TRAPPC12-205ENST00000416918 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 IGHV3-23P01764 117 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 ELANEP08246 267 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 PF4V1P10720 104 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 PAFAH1B2P68402 229 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 CFHR3Q02985 330 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 FOXE3Q13461 319 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 OR10J3Q5JRS4 329 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 C16orf54Q6UWD8 224 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 PRNTQ86SH4 94 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 NRGNQ92686 78 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 C12orf57Q99622 126 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 RPH3ALQ9UNE2 315 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
TRAPPC12-205ENST00000416918 CLPSL1A2RUU4 121 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 SNURFLB1AK76 121 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 ESDP10768 282 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 CRISP2P16562 243 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 LCN12Q6JVE5 192 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 PRR27Q6MZM9 219 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 GPHB5Q86YW7 130 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 NUP35Q8NFH5 326 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 BORCS7Q96B45 105 aa8.53□□□□□ -1.04
TRAPPC12-205ENST00000416918 HIGD1CA8MV81 97 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 A8MWP6 167 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 APCSP02743 223 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 PLA2G2AP14555 144 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 BLCAPP62952 87 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 HBBP68871 147 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 RIGQ13278 110 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 OR4X2Q8NGF9 303 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 Q96MF0 132 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 C17orf77Q96MU5 243 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 PSMG3-AS1Q96PY0 264 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 NEU1Q99519 415 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 PEF1Q9UBV8 284 aaKnown RBP8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 UFC1Q9Y3C8 167 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 SMAD5-AS1Q9Y6J3 95 aa8.52□□□□□ -1.05
TRAPPC12-205ENST00000416918 TRBV7-9A0A0J9YWB2 115 aa8.51□□□□□ -1.05
TRAPPC12-205ENST00000416918 H3BTX0 84 aa8.51□□□□□ -1.05
TRAPPC12-205ENST00000416918 HAX1O00165 279 aa8.51□□□□□ -1.05
TRAPPC12-205ENST00000416918 CHEK1O14757 476 aa8.51□□□□□ -1.05
TRAPPC12-205ENST00000416918 IGHV4-59P01825 116 aa8.51□□□□□ -1.05
TRAPPC12-205ENST00000416918 CBLN1P23435 193 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms