RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 Q6ZRG5 221 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 MIR17HGQ75NE6 70 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 TRPT1Q86TN4 253 aaKnown RBP9.34□□□□□ -0.91
YIPF3-203ENST00000416380 OR1L4Q8NGR5 311 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 PFDN5Q99471 154 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
YIPF3-203ENST00000416380 SLC17A3O00476 420 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 ISLRO14498 428 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 NDUFB4O95168 129 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 RPL7P18124 248 aaKnown RBP9.33□□□□□ -0.92
YIPF3-203ENST00000416380 S100A1P23297 94 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 HLA-DMBP28068 263 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 GALR1P47211 349 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 PSMB3P49720 205 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
YIPF3-203ENST00000416380 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 RPP25LQ8N5L8 163 aaKnown RBP9.33□□□□□ -0.92
YIPF3-203ENST00000416380 PSMG3Q9BT73 122 aaPredicted RBP9.33□□□□□ -0.92
YIPF3-203ENST00000416380 ZNF586Q9NXT0 402 aa9.33□□□□□ -0.92
YIPF3-203ENST00000416380 KNCNA6PVL3 124 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.92
YIPF3-203ENST00000416380 IFNA5P01569 189 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 SNRPCP09234 159 aaKnown RBP9.32□□□□□ -0.92
YIPF3-203ENST00000416380 CMC4P56277 68 aaPredicted RBP9.32□□□□□ -0.92
YIPF3-203ENST00000416380 RAB2AP61019 212 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 FFAR4Q5NUL3 377 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 HSD17B11Q8NBQ5 300 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 FXYD5Q96DB9 178 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 HRH4Q9H3N8 390 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 ZNF331Q9NQX6 463 aaPredicted RBP9.32□□□□□ -0.92
YIPF3-203ENST00000416380 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
YIPF3-203ENST00000416380 LINC00862A6NCI5 91 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 C17orf112F2Z3M2 114 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 H3BMM0 161 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 H3BTX0 84 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 NHLRC4P0CG21 123 aaPredicted RBP9.31□□□□□ -0.92
YIPF3-203ENST00000416380 PYYP10082 97 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 MEOX2P50222 304 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 FAM78BQ5VT40 261 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 SSX7Q7RTT5 188 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 BPIFA4PQ86YQ2 179 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 RNF141Q8WVD5 230 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 SAV1Q9H4B6 383 aaPredicted RBP9.31□□□□□ -0.92
YIPF3-203ENST00000416380 TUBA4BQ9H853 241 aa9.31□□□□□ -0.92
YIPF3-203ENST00000416380 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
YIPF3-203ENST00000416380 TRBV19A0A075B6N1 114 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 LOC102724200A0A096LPH7 203 aaPredicted RBP9.3□□□□□ -0.92
YIPF3-203ENST00000416380 KIR2DL5BA0A0G2JN68 375 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 KIR2DL5BA0A0G2JPC4 375 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 F6UB75 175 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 HLA-DRB4P13762 266 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 ZNF726P1Q15940 193 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 FAM74A1Q5RGS3 127 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 KIR2DL5AQ8N109 375 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 ZNF709Q8N972 641 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 SUN5Q8TC36 379 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 SCGB1C1Q8TD33 95 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 PCNPQ8WW12 178 aaKnown RBP9.3□□□□□ -0.92
YIPF3-203ENST00000416380 CLUHP3Q96NS8 147 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 MRPL32Q9BYC8 188 aaKnown RBP9.3□□□□□ -0.92
YIPF3-203ENST00000416380 RETNQ9HD89 108 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 KCNIP2Q9NS61 270 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 HLA-DRB4X5D2U9 266 aa9.3□□□□□ -0.92
YIPF3-203ENST00000416380 A0A0J9YX75 114 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 SPP1P10451 314 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
YIPF3-203ENST00000416380 M6PRP20645 277 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 GNPNAT1Q96EK6 184 aaPredicted RBP9.29□□□□□ -0.92
YIPF3-203ENST00000416380 OVOL2Q9BRP0 275 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 RPRMQ9NS64 109 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 MED9Q9NWA0 146 aa9.29□□□□□ -0.92
YIPF3-203ENST00000416380 LYSTQ99698 3801 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 ZNF253O75346 499 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 NMBP08949 121 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 SEC11BP0C7V7 166 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
YIPF3-203ENST00000416380 HIST1H1EP10412 219 aaKnown RBP9.28□□□□□ -0.92
YIPF3-203ENST00000416380 S100A7P31151 101 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 SNRPD3P62318 126 aaKnown RBP9.28□□□□□ -0.92
YIPF3-203ENST00000416380 SERF2P84101 59 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 PSG3Q16557 428 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 SAMD13Q5VXD3 122 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 FOXI2Q6ZQN5 318 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 S100A7AQ86SG5 101 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 COMMD7Q86VX2 200 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 C16orf92Q96LL3 132 aa9.28□□□□□ -0.92
YIPF3-203ENST00000416380 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.92
YIPF3-203ENST00000416380 ZNF705FA8MVS1 300 aaPredicted RBP9.27□□□□□ -0.93
YIPF3-203ENST00000416380 ZNF705EA8MWA4 302 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms