RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MBD2Q9UBB5 411 aa6.52□□□□□ -1.37
LINC01238-201ENST00000416204 BUB3O43684 328 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 ADAP1O75689 374 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 NXPH3O95157 252 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 HOXB5P09067 269 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 PRB4P10163 310 aaPredicted RBP6.51□□□□□ -1.37
LINC01238-201ENST00000416204 AKR1C2P52895 323 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 PSG9Q00887 426 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 IAH1Q2TAA2 248 aaPredicted RBP6.51□□□□□ -1.37
LINC01238-201ENST00000416204 LRRC37A5PQ49AS3 106 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 LYPD1Q8N2G4 141 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 OR51G1Q8NGK1 321 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 OR1S2Q8NGQ3 325 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 IL22RA2Q969J5 263 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 ACY3Q96HD9 319 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 AQP10Q96PS8 301 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 PFDN2Q9UHV9 154 aa6.51□□□□□ -1.37
LINC01238-201ENST00000416204 A0A0G2JRQ6 117 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 C3orf85A0A1B0GTC6 90 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 CORTO00230 105 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 SCGB2A1O75556 95 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 CDS2O95674 445 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 OR5AC1P0C628 307 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 TPT1P13693 172 aaKnown RBP6.5□□□□□ -1.37
LINC01238-201ENST00000416204 AZU1P20160 251 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 SP6Q3SY56 376 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 GGNBP1Q5YKI7 109 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 COMMD7Q86VX2 200 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 NPIPB3Q92617 1050 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 FRZBQ92765 325 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 GPR146Q96CH1 333 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 TP53RKQ96S44 253 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 ZNF586Q9NXT0 402 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 TMEM56-RWDD3S4R434 201 aa6.5□□□□□ -1.37
LINC01238-201ENST00000416204 TRAV30A0A087WSZ9 112 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 A0A0J9YX75 114 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 A0A0J9YY99 117 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 E5RGE8 158 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 H0YIZ8 118 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 J3QL48 77 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 M0R2Z0 102 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 NMBP08949 121 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 P0C879 139 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 RD3LP0DJH9 198 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 HTN1P15515 57 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 RAB32Q13637 225 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 SPINK13Q1W4C9 94 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 EIF5AL1Q6IS14 154 aaKnown RBP6.49□□□□□ -1.37
LINC01238-201ENST00000416204 EBLN2Q6P2I7 272 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 ALKAL2Q6UX46 152 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 BAP18Q8IXM2 172 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 EIF4E3Q8N5X7 224 aaKnown RBP6.49□□□□□ -1.37
LINC01238-201ENST00000416204 GLYATL2Q8WU03 294 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 ZNF471Q9BX82 626 aaPredicted RBP6.49□□□□□ -1.37
LINC01238-201ENST00000416204 TMEM222Q9H0R3 208 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 GSKIPQ9P0R6 139 aa6.49□□□□□ -1.37
LINC01238-201ENST00000416204 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 INS-IGF2F8WCM5 200 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 SOCS3O14543 225 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 ATP5G1P05496 136 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 PSG1P11464 419 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 SLC25A6P12236 298 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 UCP1P25874 307 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 ID1P41134 155 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 ATP5G3P48201 142 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 LINC00315P59091 139 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 S100A10P60903 97 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 YPEL3P61236 119 aaPredicted RBP6.48□□□□□ -1.37
LINC01238-201ENST00000416204 OR5I1Q13606 314 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 IGFL4Q6B9Z1 124 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 OR1S1Q8NH92 325 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 RNASE11Q8TAA1 199 aaKnown RBP6.48□□□□□ -1.37
LINC01238-201ENST00000416204 TMEM170AQ8WVE7 144 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 RBPMSQ93062 196 aaKnown RBP6.48□□□□□ -1.37
LINC01238-201ENST00000416204 Q9H3A6 140 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
LINC01238-201ENST00000416204 HEYLQ9NQ87 328 aaPredicted RBP6.48□□□□□ -1.37
LINC01238-201ENST00000416204 OR5AC2Q9NZP5 309 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 TNFRSF18Q9Y5U5 241 aa6.48□□□□□ -1.37
LINC01238-201ENST00000416204 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 PLAC8L1A1L4L8 177 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 LYRM9A8MSI8 78 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 K7EPK0 472 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 TOMM40O96008 361 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 DNAH10OSP0CZ25 163 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
LINC01238-201ENST00000416204 PVALBP20472 110 aaPredicted RBP6.47□□□□□ -1.37
LINC01238-201ENST00000416204 PSMB3P49720 205 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 ESRGQ1W209 222 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 BSXQ3C1V8 233 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 TTC32Q5I0X7 151 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 AMTNQ6UX39 209 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 LYZL2Q7Z4W2 148 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
LINC01238-201ENST00000416204 RNF125Q96EQ8 232 aa6.47□□□□□ -1.37
LINC01238-201ENST00000416204 RRNAD1Q96FB5 475 aaKnown RBP6.47□□□□□ -1.37
LINC01238-201ENST00000416204 IGF2BP2-AS1Q96M15 143 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms