RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DEDDO75618 318 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 SERF1AO75920 110 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 NRASP01111 189 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 RBP2P50120 134 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 C10orf99Q6UWK7 81 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 IL34Q6ZMJ4 242 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 SAXO1Q8IYX7 474 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 DYNAPQ8N1N2 210 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 CPNE2Q96FN4 548 aaPredicted RBP4.33□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF2Q9BSG1 426 aaPredicted RBP4.33□□□□□ -1.72
EPHA4-204ENST00000415749 FAAP24Q9BTP7 215 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 NAA60Q9H7X0 242 aa4.33□□□□□ -1.72
EPHA4-204ENST00000415749 LYSTQ99698 3801 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 PQLC2LA1A4F0 135 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 CD300LBA8K4G0 201 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 K7EPK0 472 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 GEMIN2O14893 280 aaKnown RBP4.32□□□□□ -1.72
EPHA4-204ENST00000415749 PDCD6O75340 191 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 ATG12O94817 140 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 NAPSAO96009 420 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 CD5P06127 495 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 OR5AL1P0C617 328 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 IGHV3-43DP0DP04 118 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 GABRR1P24046 479 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 SULT1A2P50226 295 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 RBM11P57052 281 aaKnown RBP4.32□□□□□ -1.72
EPHA4-204ENST00000415749 CACNG7P62955 275 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 RAB31Q13636 194 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 RSU1Q15404 277 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 GUCA2BQ16661 112 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 PIGYQ3MUY2 71 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 RPL7L1Q6DKI1 246 aaKnown RBP4.32□□□□□ -1.72
EPHA4-204ENST00000415749 CALHM1Q8IU99 346 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 C11orf53Q8IXP5 236 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 MKXQ8IYA7 352 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 OSR2Q8N2R0 312 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 FAM71E2Q8N5Q1 922 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 UBAC2Q8NBM4 344 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 OR10Z1Q8NGY1 313 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 ARL11Q969Q4 196 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 MALSU1Q96EH3 234 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 BORCS8Q96FH0 119 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF488Q96MN9 340 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 CMSS1Q9BQ75 279 aaKnown RBP4.32□□□□□ -1.72
EPHA4-204ENST00000415749 C20orf144Q9BQM9 153 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 EDA2RQ9HAV5 297 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 PLEKHJ1Q9NW61 149 aa4.32□□□□□ -1.72
EPHA4-204ENST00000415749 C14orf166Q9Y224 244 aaKnown RBP4.32□□□□□ -1.72
EPHA4-204ENST00000415749 TRBV6-6A0A0A6YYG2 114 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 APOC3P02656 99 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF728P0DKX0 622 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 RPL12P30050 165 aaKnown RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 LPAR6P43657 344 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 CAV2P51636 162 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 PIGPP57054 158 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 IAH1Q2TAA2 248 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF880Q6PDB4 577 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 SGPP2Q8IWX5 399 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 FLYWCH2Q96CP2 140 aaKnown RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 TMEM56Q96MV1 263 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 S100A13Q99584 98 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 VGLL1Q99990 258 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 RASL11BQ9BPW5 248 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 NRIP2Q9BQI9 281 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 GINS3Q9BRX5 216 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 RSG1Q9BU20 258 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 ADAT1Q9BUB4 502 aaKnown RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 SEC11CQ9BY50 192 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 PARD6GQ9BYG4 376 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 NKX6-2Q9C056 277 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF286AQ9HBT8 521 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 WFDC1Q9HC57 220 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 PARP11Q9NR21 331 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 SLC2A9Q9NRM0 540 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 UQCC1Q9NVA1 299 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 F11RQ9Y624 299 aaKnown RBP4.31□□□□□ -1.72
EPHA4-204ENST00000415749 TMEM56-RWDD3S4R434 201 aa4.31□□□□□ -1.72
EPHA4-204ENST00000415749 CSMD3Q7Z407 3707 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 A0A1B0GW64 132 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF850A8MQ14 1090 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 C9JQL5 133 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 GPR31O00270 319 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 TFF1P04155 84 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 OR5AC1P0C628 307 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 FOLR2P14207 255 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 RCC1P18754 421 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 FUT3P21217 361 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 CEACAM6P40199 344 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 DYNLT3P51808 116 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 EIF5AP63241 154 aaKnown RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 PRDX4Q13162 271 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 CEACAM21Q3KPI0 293 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 ABCA11PQ4W5N1 156 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 COA6Q5JTJ3 125 aaKnown RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF493Q6ZR52 646 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms