RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 NINJ2Q9NZG7 142 aa0.98□□□□□ -2.25
LINC00428-201ENST00000415620 MRPL36Q9P0J6 103 aaKnown RBP0.98□□□□□ -2.25
LINC00428-201ENST00000415620 PSMC3IPQ9P2W1 217 aaPredicted RBP0.98□□□□□ -2.25
LINC00428-201ENST00000415620 PEX16Q9Y5Y5 336 aa0.98□□□□□ -2.25
LINC00428-201ENST00000415620 TRAV12-3A0A0B4J271 114 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 IGKV1-6A0A0C4DH72 117 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 EVPLLA8MZ36 301 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RBFOX2O43251 390 aaKnown RBP eCLIP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 ZNF254O75437 659 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 DUSP14O95147 198 aaKnown RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 TMEM50AO95807 157 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 MT1BP07438 61 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 OR10J4P0C629 311 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 POLR2JP52435 117 aaKnown RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 TCL1AP56279 114 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 CXCR4P61073 352 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 PSME3P61289 254 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 SNRPGP62308 76 aaKnown RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 POLR2GP62487 172 aaKnown RBP eCLIP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RHOBP62745 196 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RPL30P62888 115 aaKnown RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 CDK5Q00535 292 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RPL18AQ02543 176 aaKnown RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 TPBGQ13641 420 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 CCDC153Q494R4 210 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 LRRC23Q53EV4 343 aaPredicted RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 MEDAGQ5VYS4 303 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 DEGS2Q6QHC5 323 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 CLPSL2Q6UWE3 100 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 MSANTD1Q6ZTZ1 278 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 IQCF2Q8IXL9 164 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RNF182Q8N6D2 247 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 C15orf56Q8N910 161 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 OR51A4Q8NGJ6 313 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 OR2G2Q8NGZ5 317 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 TMEM230Q96A57 120 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 C20orf166-AS1Q96NR2 134 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 TEX12Q9BXU0 123 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 OR51M1Q9H341 326 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 ZNF331Q9NQX6 463 aaPredicted RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RDH8Q9NYR8 311 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 ABRACLQ9P1F3 81 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 DCDC2Q9UHG0 476 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RNF24Q9Y225 148 aa0.97□□□□□ -2.25
LINC00428-201ENST00000415620 RBMX2Q9Y388 322 aaKnown RBP0.97□□□□□ -2.25
LINC00428-201ENST00000415620 C9orf92A6NGG3 77 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 SCGB2A1O75556 95 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 DIRAS1O95057 198 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 IGKV1-17P01599 117 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 TPM3P06753 285 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 PFN1P07737 140 aaKnown RBP0.96□□□□□ -2.26
LINC00428-201ENST00000415620 CD3GP09693 182 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 PSMA1P25786 263 aaKnown RBP0.96□□□□□ -2.26
LINC00428-201ENST00000415620 RPS10P46783 165 aaKnown RBP0.96□□□□□ -2.26
LINC00428-201ENST00000415620 NUDT2P50583 147 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 GZMMP51124 257 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 ACTR3P61158 418 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 CTAG1AP78358 180 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 HIST1H1AQ02539 215 aaPredicted RBP0.96□□□□□ -2.26
LINC00428-201ENST00000415620 Q0VG73 95 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 EIF4EBP1Q13541 118 aaPredicted RBP0.96□□□□□ -2.26
LINC00428-201ENST00000415620 LRRC37A5PQ49AS3 106 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 IFI44LQ53G44 452 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 TNFAIP8L3Q5GJ75 292 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 OR2G6Q5TZ20 316 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 AADACL3Q5VUY0 350 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 SAMD13Q5VXD3 122 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 TTC23Q5W5X9 447 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 DLEU7Q6UYE1 221 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 RASSF6Q6ZTQ3 369 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 MOB1BQ7L9L4 216 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 ZNF546Q86UE3 836 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 ZNF680Q8NEM1 530 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 OR51A2Q8NGJ7 313 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 OR10G4Q8NGN3 311 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 OR10A6Q8NH74 314 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 SETD6Q8TBK2 473 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 DYDC1Q8WWB3 177 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 GPER1Q99527 375 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 SLC50A1Q9BRV3 221 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 CENPOQ9BU64 300 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 C20orf27Q9GZN8 174 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 COMMD5Q9GZQ3 224 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 TMEM222Q9H0R3 208 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 C20orf85Q9H1P6 137 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 RIBC2Q9H4K1 309 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 HRASLSQ9HDD0 168 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 TP73-AS1Q9UF72 201 aa0.96□□□□□ -2.26
LINC00428-201ENST00000415620 A0A087WX48 190 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 TRAV8-2A0A0B4J237 113 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 TEX50A0A1B0GTY4 177 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 A0A1W2PRQ8 180 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 FAM24AA6NFZ4 105 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 OR4C45A6NMZ5 311 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 UPK2O00526 184 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 SNAI2O43623 268 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 NOL3O60936 208 aaKnown RBP0.95□□□□□ -2.26
LINC00428-201ENST00000415620 HPRT1P00492 218 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms