RNA–Protein interactions for RNA: ENST00000415276.2

HCG27-203, Transcript of HLA complex group 27, humanhuman

TSL 3

Gene HCG27, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-203ENST00000415276 FOXI2Q6ZQN5 318 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 BPIFA4PQ86YQ2 179 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 ZNF709Q8N972 641 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 C17orf77Q96MU5 243 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 ATP5SQ99766 215 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 KRTAP4-5Q9BYR2 181 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 WDR61Q9GZS3 305 aaKnown RBP9.46□□□□□ -0.9
HCG27-203ENST00000415276 KCNIP2Q9NS61 270 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 RPRMQ9NS64 109 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 HERC1Q15751 4861 aa9.46□□□□□ -0.9
HCG27-203ENST00000415276 C17orf112F2Z3M2 114 aa9.45□□□□□ -0.9
HCG27-203ENST00000415276 H3BMM0 161 aa9.45□□□□□ -0.9
HCG27-203ENST00000415276 MRPS12O15235 138 aaKnown RBP9.45□□□□□ -0.9
HCG27-203ENST00000415276 GIPP09681 153 aaPredicted RBP9.45□□□□□ -0.9
HCG27-203ENST00000415276 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
HCG27-203ENST00000415276 NUTF2P61970 127 aaKnown RBP9.45□□□□□ -0.9
HCG27-203ENST00000415276 SPATA31B1PQ5VZV4 182 aa9.45□□□□□ -0.9
HCG27-203ENST00000415276 LRRC20Q8TCA0 184 aa9.45□□□□□ -0.9
HCG27-203ENST00000415276 SAV1Q9H4B6 383 aaPredicted RBP9.45□□□□□ -0.9
HCG27-203ENST00000415276 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
HCG27-203ENST00000415276 AGRNO00468 2067 aa9.44□□□□□ -0.9
HCG27-203ENST00000415276 IFNA5P01569 189 aa9.44□□□□□ -0.9
HCG27-203ENST00000415276 CXCL2P19875 107 aa9.44□□□□□ -0.9
HCG27-203ENST00000415276 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
HCG27-203ENST00000415276 SCGB1C1Q8TD33 95 aa9.44□□□□□ -0.9
HCG27-203ENST00000415276 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
HCG27-203ENST00000415276 TRAV8-2A0A0B4J237 113 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 CXorf65A6NEN9 183 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 MORN5Q5VZ52 161 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 C20orf173Q96LM9 149 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 RARRES2Q99969 163 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
HCG27-203ENST00000415276 PARD6GQ9BYG4 376 aaPredicted RBP9.43□□□□□ -0.9
HCG27-203ENST00000415276 DYNC1H1Q14204 4646 aaKnown RBP9.43□□□□□ -0.9
HCG27-203ENST00000415276 TRAV5A0A0B4J249 113 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 A0A0J9YX75 114 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
HCG27-203ENST00000415276 C4BPBP20851 252 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 DEFB1P60022 68 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 IGFL4Q6B9Z1 124 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 RNF182Q8N6D2 247 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 OR4B1Q8NGF8 309 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 AQP10Q96PS8 301 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 HRH4Q9H3N8 390 aa9.42□□□□□ -0.9
HCG27-203ENST00000415276 F6UB75 175 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 DUSP14O95147 198 aaKnown RBP9.41□□□□□ -0.9
HCG27-203ENST00000415276 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 PMS2P11Q13670 270 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 GUK1Q16774 197 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 Q5BKY6 102 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 FAM78BQ5VT40 261 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 ZNF738Q8NE65 137 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 OR2T35Q8NGX2 323 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 WFDC1Q9HC57 220 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 ZNF331Q9NQX6 463 aaPredicted RBP9.41□□□□□ -0.9
HCG27-203ENST00000415276 KLK5Q9Y337 293 aaPredicted RBP9.41□□□□□ -0.9
HCG27-203ENST00000415276 FAT2Q9NYQ8 4349 aa9.41□□□□□ -0.9
HCG27-203ENST00000415276 DNAH2Q9P225 4427 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 A0A0J9YWU9 116 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 PSG9Q00887 426 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 ZNF266Q14584 549 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 PSG3Q16557 428 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 CEMP1Q6PRD7 247 aaPredicted RBP9.4□□□□□ -0.9
HCG27-203ENST00000415276 INO80EQ8NBZ0 244 aaPredicted RBP9.4□□□□□ -0.9
HCG27-203ENST00000415276 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
HCG27-203ENST00000415276 CLEC5AQ9NY25 188 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 TMEM14CQ9P0S9 112 aa9.4□□□□□ -0.9
HCG27-203ENST00000415276 A8MTW9 85 aa9.39□□□□□ -0.91
HCG27-203ENST00000415276 H3BQ15 152 aa9.39□□□□□ -0.91
HCG27-203ENST00000415276 SNRPCP09234 159 aaKnown RBP9.39□□□□□ -0.91
HCG27-203ENST00000415276 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
HCG27-203ENST00000415276 CSNK1G2-AS1Q8NCQ2 148 aa9.39□□□□□ -0.91
HCG27-203ENST00000415276 SAT2Q96F10 170 aaPredicted RBP9.39□□□□□ -0.91
HCG27-203ENST00000415276 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
HCG27-203ENST00000415276 FUT9Q9Y231 359 aa9.39□□□□□ -0.91
HCG27-203ENST00000415276 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 FXYD6-FXYD2A0A087WZ82 144 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 H3BTX0 84 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 ZNF253O75346 499 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
HCG27-203ENST00000415276 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
HCG27-203ENST00000415276 LINC00336Q6ZUF6 198 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 SLC25A2Q9BXI2 301 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 ZNF586Q9NXT0 402 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 TIMM9Q9Y5J7 89 aa9.38□□□□□ -0.91
HCG27-203ENST00000415276 ZNF705EA8MWA4 302 aaPredicted RBP9.37□□□□□ -0.91
HCG27-203ENST00000415276 SLC17A3O00476 420 aa9.37□□□□□ -0.91
HCG27-203ENST00000415276 MIFP14174 115 aa9.37□□□□□ -0.91
HCG27-203ENST00000415276 FXYD7P58549 80 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms