RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CLEC7AQ9BXN2 247 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 TRAV38-1A0A0B4J264 116 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 SPRY3O43610 288 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 P0C879 139 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 SRIP30626 198 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 MPV17P39210 176 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 HOXA4Q00056 320 aaPredicted RBP7.48□□□□□ -1.21
SNHG3-201ENST00000413987 PSG7Q13046 419 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 PMVKQ15126 192 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 MSMPQ1L6U9 139 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 ZNF718Q3SXZ3 478 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 KIAA2026Q5HYC2 2103 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 ARL2-SNX15V9GYD0 113 aa7.48□□□□□ -1.21
SNHG3-201ENST00000413987 CELSR2Q9HCU4 2923 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 TAX1BP3O14907 124 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 APCSP02743 223 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 OR5AL1P0C617 328 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 ARL14EPLP0DKL9 152 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 CATR1Q13166 79 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 ASPHD1Q5U4P2 390 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 TEX36Q5VZQ5 186 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 DRAM1Q8N682 238 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 DEFB125Q8N687 156 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 LINC01560Q8TB33 94 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 SLC25A40Q8TBP6 338 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 FGF23Q9GZV9 251 aaPredicted RBP7.47□□□□□ -1.21
SNHG3-201ENST00000413987 HES4Q9HCC6 221 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 ABCA4P78363 2273 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 ODAMA1E959 279 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 C16orf97H3BN30 126 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 M0R1X1 148 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 BMPR1BO00238 502 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 MRPS12O15235 138 aaKnown RBP7.47□□□□□ -1.21
SNHG3-201ENST00000413987 PSG1P11464 419 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 IGLL1P15814 213 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 NTF3P20783 257 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 FABP6P51161 128 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 GPM6AP51674 278 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 EDDM3BP56851 147 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 UBE2G1P62253 170 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 Q8N7P7 452 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 OR8B3Q8NGG8 313 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 LINC00477Q96M19 166 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 OR8B2Q96RD0 313 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 TMEM126AQ9H061 195 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 KCNIP1Q9NZI2 227 aa7.47□□□□□ -1.21
SNHG3-201ENST00000413987 FAM181BA6NEQ2 426 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 K7EMT4 169 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 CD5LO43866 347 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 CLDN14O95500 239 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 IGLV1-44P01699 117 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 GCHFRP30047 84 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 GNG4P50150 75 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.22
SNHG3-201ENST00000413987 OR2K2Q8NGT1 345 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 OR2D2Q9H210 308 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 ZNF331Q9NQX6 463 aaPredicted RBP7.46□□□□□ -1.22
SNHG3-201ENST00000413987 GAGE12BA1L429 117 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 LYRM9A8MSI8 78 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 VWC2LB2RUY7 222 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 ISLRO14498 428 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 CA6P23280 308 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 G6PCP35575 357 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 HSPE1P61604 102 aaKnown RBP7.46□□□□□ -1.22
SNHG3-201ENST00000413987 KIAA1644Q3SXP7 199 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 ZFAND6Q6FIF0 208 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 FAM19A2Q8N3H0 131 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 ZNF645Q8N7E2 425 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 C8orf46Q8TAG6 207 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 KLF14Q8TD94 323 aaPredicted RBP7.46□□□□□ -1.22
SNHG3-201ENST00000413987 SPANXCQ9NY87 97 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 OR51B2Q9Y5P1 312 aa7.46□□□□□ -1.22
SNHG3-201ENST00000413987 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 IZUMO1RA6ND01 250 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 M0R2Z0 102 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 CORTO00230 105 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 DEFA4P12838 97 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 NPY1RP25929 384 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 BSPH1Q075Z2 132 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 BVES-AS1Q5T3Y7 98 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 NEUROG1Q92886 237 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 IL36RNQ9UBH0 155 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 WASHC3Q9Y3C0 194 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 YTHDF2Q9Y5A9 579 aaKnown RBP7.45□□□□□ -1.22
SNHG3-201ENST00000413987 FAM208BQ5VWN6 2430 aa7.45□□□□□ -1.22
SNHG3-201ENST00000413987 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 TMEM189A5PLL7 270 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 C15orf62A8K5M9 175 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 MPV17L2Q567V2 206 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 Q56UQ5 140 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 AMMECR1LQ6DCA0 310 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 LCN12Q6JVE5 192 aa7.44□□□□□ -1.22
SNHG3-201ENST00000413987 SLC25A34Q6PIV7 304 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms