RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MAPK1IP1LQ8NDC0 245 aa13.91□□□□□ -0.18
PHRF1-202ENST00000413872 SCGB1A1P11684 91 aa13.91□□□□□ -0.18
PHRF1-202ENST00000413872 LYZL1Q6UWQ5 148 aa13.91□□□□□ -0.18
PHRF1-202ENST00000413872 C8orf31Q8N9H6 132 aa13.91□□□□□ -0.18
PHRF1-202ENST00000413872 CADP27708 2225 aa13.91□□□□□ -0.18
PHRF1-202ENST00000413872 SHISA9B4DS77 424 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 CA1P00915 261 aaPredicted RBP13.9□□□□□ -0.18
PHRF1-202ENST00000413872 IFI27L1Q96BM0 104 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 CHTOPQ9Y3Y2 248 aaKnown RBP13.9□□□□□ -0.18
PHRF1-202ENST00000413872 C15orf65H3BRN8 121 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 VCYO14598 125 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 DEFB131AP59861 70 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 ELANEP08246 267 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 ZNF876PQ49A33 203 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 NDUFA4O00483 81 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 DKK1O94907 266 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 EVI2AP22794 236 aa13.9□□□□□ -0.18
PHRF1-202ENST00000413872 ZFHX2Q9C0A1 2572 aaPredicted RBP13.9□□□□□ -0.18
PHRF1-202ENST00000413872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■■■■□ 23.9
PHRF1-202ENST00000413872 ZNRD1Q9P1U0 126 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 E9PQ18 207 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 HEATR5AQ86XA9 2040 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 LINC00587B1AMM8 73 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 Q8TAT8 98 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 HELZP42694 1942 aaKnown RBP13.89□□□□□ -0.19
PHRF1-202ENST00000413872 NIT1Q86X76 327 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 RSPO3Q9BXY4 272 aaPredicted RBP13.89□□□□□ -0.19
PHRF1-202ENST00000413872 MYLKQ15746 1914 aa13.89□□□□□ -0.19
PHRF1-202ENST00000413872 IGHV2-5P01817 119 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 PLNP26678 52 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 C14orf144Q96I85 54 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 H3BUA1 57 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 MORN3Q6PF18 240 aaPredicted RBP13.88□□□□□ -0.19
PHRF1-202ENST00000413872 TMEM86BQ8N661 226 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 CREBBPQ92793 2442 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 SLC25A20O43772 301 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 GZMBP10144 247 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 MLANAQ16655 118 aa13.88□□□□□ -0.19
PHRF1-202ENST00000413872 Q86TA4 180 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 SLC25A2Q9BXI2 301 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 IGHV2-70P01814 119 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 CTAG1AP78358 180 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 DUX4L9Q6RFH8 374 aaPredicted RBP13.87□□□□□ -0.19
PHRF1-202ENST00000413872 OR5A1Q8NGJ0 315 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 RHODO00212 210 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 IGKCP01834 107 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 LINC00469Q8N7U9 141 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 G3V318 75 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 SELENOKQ9Y6D0 94 aa13.87□□□□□ -0.19
PHRF1-202ENST00000413872 C21orf62-AS1Q17RA5 79 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 LAMTOR2Q9Y2Q5 125 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 K7EM74 188 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 GFI1BQ5VTD9 330 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 Q8NFD4 153 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 TRAV9-2A0A087WT02 112 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 D6R8Y8 96 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 DERL1Q9BUN8 251 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 GFRA4Q9GZZ7 299 aa13.86□□□□□ -0.19
PHRF1-202ENST00000413872 IGKV3D-20A0A0C4DH25 116 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 POU2AF1Q16633 256 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 TMEM75Q8N9X5 138 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BKO60814 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BJP06899 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BOP23527 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BBP33778 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BDP58876 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BCP62807 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST2H2BEQ16778 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BHQ93079 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BNQ99877 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 HIST1H2BMQ99879 126 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 APOMO95445 188 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 FXYD7P58549 80 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 FAM90A2PQ658T7 463 aa13.85□□□□□ -0.19
PHRF1-202ENST00000413872 TMEM249Q2WGJ8 235 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 DEFB113Q30KQ7 82 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 MRPL27Q9P0M9 148 aaKnown RBP13.84□□□□□ -0.19
PHRF1-202ENST00000413872 GTF3C1Q12789 2109 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 TRAV8-1A0A0A6YYK1 113 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 SPRY4Q9C004 299 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 TEX43Q6ZNM6 134 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 IL17RELQ6ZVW7 336 aa13.84□□□□□ -0.19
PHRF1-202ENST00000413872 CKS1BP61024 79 aa13.83□□□□□ -0.19
PHRF1-202ENST00000413872 MST1LQ2TV78 715 aa13.83□□□□□ -0.19
PHRF1-202ENST00000413872 NUP35Q8NFH5 326 aa13.83□□□□□ -0.19
PHRF1-202ENST00000413872 ZNF492Q9P255 531 aa13.83□□□□□ -0.2
PHRF1-202ENST00000413872 IGFL4Q6B9Z1 124 aa13.83□□□□□ -0.2
PHRF1-202ENST00000413872 ZGRF1Q86YA3 2104 aa13.83□□□□□ -0.2
PHRF1-202ENST00000413872 SNAI2O43623 268 aa13.83□□□□□ -0.2
PHRF1-202ENST00000413872 PLEKHB2Q96CS7 222 aa13.83□□□□□ -0.2
PHRF1-202ENST00000413872 FAM231BA6NCW3 169 aa13.82□□□□□ -0.2
PHRF1-202ENST00000413872 DKK4Q9UBT3 224 aa13.82□□□□□ -0.2
PHRF1-202ENST00000413872 YLPM1P49750 1951 aaKnown RBP13.82□□□□□ -0.2
PHRF1-202ENST00000413872 NCR2O95944 276 aa13.82□□□□□ -0.2
PHRF1-202ENST00000413872 VPREB3Q9UKI3 123 aa13.82□□□□□ -0.2
PHRF1-202ENST00000413872 C22orf46C9J442 243 aa13.82□□□□□ -0.2
PHRF1-202ENST00000413872 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
PHRF1-202ENST00000413872 C14orf178Q8N769 122 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms