RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TMEM75Q8N9X5 138 aa11.53□□□□□ -0.56
SEMA3F-202ENST00000413852 TMEM186Q96B77 213 aa11.53□□□□□ -0.56
SEMA3F-202ENST00000413852 THYN1Q9P016 225 aa11.53□□□□□ -0.56
SEMA3F-202ENST00000413852 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
SEMA3F-202ENST00000413852 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
SEMA3F-202ENST00000413852 TEX22C9J3V5 150 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 IGKV1-17P01599 117 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 LINC01545Q5VT33 79 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 PET117Q6UWS5 81 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 FAM169BQ8N8A8 192 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 Q8TAT8 98 aa11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 RALYQ9UKM9 306 aaKnown RBP11.52□□□□□ -0.56
SEMA3F-202ENST00000413852 TMEM265A0A087WTH1 108 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 C1orf185Q5T7R7 199 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 LYZL1Q6UWQ5 148 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 C12orf54Q6X4T0 127 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 MEGF9Q9H1U4 602 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 HSPB8Q9UJY1 196 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 NPIPB6E9PJ23 425 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 FTH1P19P0C7X4 201 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 SIGLEC8Q9NYZ4 499 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 PSG8Q9UQ74 426 aa11.52□□□□□ -0.57
SEMA3F-202ENST00000413852 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 LY6HO94772 140 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 COX8AP10176 69 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 HLA-DMBP28068 263 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 HIST1H1AQ02539 215 aaPredicted RBP11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 RASL11BQ9BPW5 248 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 OTORQ9NRC9 128 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 INSIG2Q9Y5U4 225 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 M0R296 226 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 NMUP48645 174 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 TMEM97Q5BJF2 176 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 MSRB1Q9NZV6 116 aa11.51□□□□□ -0.57
SEMA3F-202ENST00000413852 CNIH1O95406 144 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 IL4P05112 153 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 THBDP07204 575 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 PPIFP30405 207 aaKnown RBP11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 DLX6P56179 175 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 MEF2CQ06413 473 aaPredicted RBP11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 CD5LO43866 347 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 PPP1R27Q86WC6 154 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 C1RLQ9NZP8 487 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 DKK2Q9UBU2 259 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 INS-IGF2F8WCM5 200 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 FGF6P10767 208 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 COL12A1Q99715 3063 aa11.5□□□□□ -0.57
SEMA3F-202ENST00000413852 A0A0G2JNJ9 132 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 CT83Q5H943 113 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 TMEM108Q6UXF1 575 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 OR4A5Q8NH83 315 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 NGBQ9NPG2 151 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 Q9UFV3 132 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 IGHV1-3A0A0C4DH29 117 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
SEMA3F-202ENST00000413852 I3L2K1 104 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 SIGLEC15Q6ZMC9 328 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 GFRA4Q9GZZ7 299 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 CUL9Q8IWT3 2517 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 GOSR1O95249 250 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 TMEM155Q4W5P6 130 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 OR10AG1Q8NH19 301 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 GATA1P15976 413 aaPredicted RBP11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 RIGQ13278 110 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 DYNLRB1Q9NP97 96 aa11.48□□□□□ -0.57
SEMA3F-202ENST00000413852 EVI2AP22794 236 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 ZNF292O60281 2723 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 SPTA1P02549 2419 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 NPIPB5A8MRT5 1133 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 NPYP01303 97 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 CRYGBP07316 175 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 KIR3DS1Q14943 382 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 SOX21Q9Y651 276 aaPredicted RBP11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 K7EIM0 57 aa11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 ZNF80P51504 273 aaPredicted RBP11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 PEF1Q9UBV8 284 aaKnown RBP11.47□□□□□ -0.57
SEMA3F-202ENST00000413852 K7ERJ3 54 aa11.46□□□□□ -0.57
SEMA3F-202ENST00000413852 MC5RP33032 325 aa11.46□□□□□ -0.57
SEMA3F-202ENST00000413852 LGALS7P47929 136 aa11.46□□□□□ -0.57
SEMA3F-202ENST00000413852 PSG3Q16557 428 aa11.46□□□□□ -0.57
SEMA3F-202ENST00000413852 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.57
SEMA3F-202ENST00000413852 AKAP6Q13023 2319 aa11.46□□□□□ -0.57
SEMA3F-202ENST00000413852 TLN1Q9Y490 2541 aaKnown RBP11.46□□□□□ -0.58
SEMA3F-202ENST00000413852 FBLL1A6NHQ2 334 aaKnown RBP11.46□□□□□ -0.58
SEMA3F-202ENST00000413852 SH2D1AO60880 128 aa11.46□□□□□ -0.58
SEMA3F-202ENST00000413852 PPBPP02775 128 aa11.46□□□□□ -0.58
SEMA3F-202ENST00000413852 CSN1S1P47710 185 aa11.46□□□□□ -0.58
SEMA3F-202ENST00000413852 MS4A6AQ9H2W1 248 aa11.46□□□□□ -0.58
SEMA3F-202ENST00000413852 VPS13CQ709C8 3753 aa11.45□□□□□ -0.58
SEMA3F-202ENST00000413852 C16orf97H3BN30 126 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms