RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 NCAPD3P42695 1498 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 ZNF518AQ6AHZ1 1483 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 PHLPP1O60346 1717 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 FBN1P35555 2871 aaKnown RBP1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 POLEQ07864 2286 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 UNC79Q9P2D8 2635 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 A0A1B0GW64 132 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 C2orf70A6NJV1 201 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 C9JAW5 83 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 GABARAPH6UMI1 98 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 TMEM256-PLSCR3K7ERE1 68 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 TIMM17BO60830 172 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 GGCTO75223 188 aaKnown RBP1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 PLCXD2Q0VAA5 305 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 EIF3IQ13347 325 aaKnown RBP1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 Q5XG85 94 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 C22orf39Q6P5X5 142 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 Q8N2B8 174 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 CANT1Q8WVQ1 401 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 BORCS8Q96FH0 119 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 SLC25A21Q9BQT8 299 aaPredicted RBP1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 OR2H1Q9GZK4 316 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 OTORQ9NRC9 128 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 HIGD1AQ9Y241 93 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 U3KQ87 197 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 OVOS2A0A0J9YW53 1432 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 OVOS2Q6IE36 1432 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 NALCNQ8IZF0 1738 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 NUP98P52948 1817 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 FOCADQ5VW36 1801 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 MYH7P12883 1935 aa1.79□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRPM1Q7Z4N2 1603 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 ARHGEF11O15085 1522 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRAPPC8Q9Y2L5 1435 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 CCDC171Q6TFL3 1326 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 DLEU1O43261 78 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 OR1I1O60431 355 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 EVI2AP22794 236 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 RHOGP84095 191 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 HIST1H1AQ02539 215 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 C1orf140Q5VVS0 124 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 OR8I2Q8N0Y5 310 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 SFT2D1Q8WV19 159 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 CACYBPQ9HB71 228 aaKnown RBP1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 HS3ST2Q9Y278 367 aa1.78□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRBV7-6A0A0J9YX20 115 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 CCDC160A6NGH7 325 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 MRPS14O60783 128 aaKnown RBP1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 OR2H2O95918 312 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 IFT20Q8IY31 132 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 TCTE3Q8IZS6 198 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 C3orf56Q8N813 242 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 OR4K15Q8NH41 348 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 OR4C6Q8NH72 309 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 CALML5Q9NZT1 146 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 RNF11Q9Y3C5 154 aa1.77□□□□□ -2.13
HMGB3P31-201ENST00000413333 A2MP01023 1474 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 PTPRGP23470 1445 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 TNS3Q68CZ2 1445 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 TRAV5A0A0B4J249 113 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 TPST1O60507 370 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 LYZL6O75951 148 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 DPM2O94777 84 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 RNASE3P12724 160 aaKnown RBP1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 KDELR1P24390 212 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 CMPK1P30085 196 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 DYNLT3P51808 116 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 RRAS2P62070 204 aaPredicted RBP1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 MYL5Q02045 173 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 VMA21Q3ZAQ7 101 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 PHF5AQ7RTV0 110 aaKnown RBP1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 CROCCP2Q86T23 111 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 DEFB119Q8N690 84 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 ZC2HC1AQ96GY0 325 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 NPCDR1Q9BY65 106 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 NAT8BQ9UHF3 227 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 ERG28Q9UKR5 140 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 INTS1Q8N201 2190 aaKnown RBP1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 COL4A5P29400 1685 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 SCRIBQ14160 1630 aa1.76□□□□□ -2.13
HMGB3P31-201ENST00000413333 SMG6Q86US8 1419 aaKnown RBP1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 SDK1Q7Z5N4 2213 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 ROCK2O75116 1388 aaKnown RBP1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 TRAV12-1A0A0B4J245 112 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 IGHV1-58A0A0C4DH39 117 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 IGKV3D-7A0A0C4DH55 119 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 IGKV3OR2-268A0A0C4DH90 116 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 LOC107984640A0A0U1RRK4 108 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 ODAMA1E959 279 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 SMIM24O75264 130 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 PRB1P04280 392 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 MSMO1Q15800 293 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 WHAMMP3Q1A5X7 153 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 GLYATL3Q5SZD4 288 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 EIF5AL1Q6IS14 154 aaKnown RBP1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 Q8IYB0 196 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 CLECL1Q8IZS7 167 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 OR2T35Q8NGX2 323 aa1.75□□□□□ -2.13
HMGB3P31-201ENST00000413333 PPTC7Q8NI37 304 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms