RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 SMAD5-AS1Q9Y6J3 95 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 NF1P21359 2839 aa5.07□□□□□ -1.6
VPS41-204ENST00000413141 MAST4O15021 2626 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 A0A1B0GUS0 222 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 A0A1W2PRX2 142 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 A0A1W2PS18 150 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 WIPF1O43516 503 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 ZNF253O75346 499 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 APOC3P02656 99 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 EDN2P20800 178 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 GALR1P47211 349 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 KRTAP10-3P60369 221 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 RANP62826 216 aaKnown RBP5.06□□□□□ -1.6
VPS41-204ENST00000413141 SUMO1P63165 101 aaKnown RBP5.06□□□□□ -1.6
VPS41-204ENST00000413141 KLF5Q13887 457 aaPredicted RBP5.06□□□□□ -1.6
VPS41-204ENST00000413141 GUCA2BQ16661 112 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 TM4SF20Q53R12 229 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 SOHLH1Q5JUK2 328 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 SIGLEC15Q6ZMC9 328 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 OR1N2Q8NGR9 330 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 RPUSD4Q96CM3 377 aaKnown RBP5.06□□□□□ -1.6
VPS41-204ENST00000413141 GRAMD2BQ96HH9 432 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 RAX2Q96IS3 184 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 DUX3Q96PT4 197 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 DERL1Q9BUN8 251 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 ELOVL1Q9BW60 279 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 RHPN1-AS1Q9BWJ2 59 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 PARLQ9H300 379 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 OTORQ9NRC9 128 aa5.06□□□□□ -1.6
VPS41-204ENST00000413141 C2CD3Q4AC94 2353 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 C2orf70A6NJV1 201 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 ADARB2-AS1A8MUL3 147 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 PEX7O00628 323 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 CHEK1O14757 476 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 SLC25A5P05141 298 aaKnown RBP5.05□□□□□ -1.6
VPS41-204ENST00000413141 BMI1P35226 326 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 MEOX2P50222 304 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 GNG5P63218 68 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 PSG9Q00887 426 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 ZNF674Q2M3X9 581 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 LYPD1Q8N2G4 141 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 EXOC3-AS1Q8N2X6 119 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 SVBPQ8N300 66 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 C5orf17Q8NAS9 161 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 C2CD4CQ8TF44 421 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 DPF1Q92782 380 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 SMIM7Q9BQ49 75 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 SLC50A1Q9BRV3 221 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 NIPSNAP3BQ9BS92 247 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 ZNF331Q9NQX6 463 aaPredicted RBP5.05□□□□□ -1.6
VPS41-204ENST00000413141 SMPXQ9UHP9 88 aa5.05□□□□□ -1.6
VPS41-204ENST00000413141 TRBV20OR9-2A0A075B6H5 130 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 PGPA6NDG6 321 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 HELTA6NFD8 242 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 ZNF785A8K8V0 405 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 ZNF727A8MUV8 499 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 CCL24O00175 119 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 TCRAP04437 139 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 AKR1C3P42330 323 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 RPL35P42766 123 aaKnown RBP5.04□□□□□ -1.6
VPS41-204ENST00000413141 FOXL1Q12952 345 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 NDUFA11Q86Y39 141 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 OR9G4Q8NGQ1 327 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 CMTM2Q8TAZ6 248 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 DLX4Q92988 240 aaPredicted RBP5.04□□□□□ -1.6
VPS41-204ENST00000413141 HIST1H2BAQ96A08 127 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 ATG101Q9BSB4 218 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 NRN1Q9NPD7 142 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 PEMTQ9UBM1 199 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 NAT8Q9UHE5 227 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 EPDR1Q9UM22 224 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 RPH3ALQ9UNE2 315 aa5.04□□□□□ -1.6
VPS41-204ENST00000413141 TRAV8-2A0A0B4J237 113 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 C9JCJ5 164 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 M0QZ24 198 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 M0R3E3 92 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 SOCS3O14543 225 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 SNAPINO95295 136 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 FOLR2P14207 255 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 CBLN1P23435 193 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 HLA-DMBP28068 263 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 CNN1P51911 297 aaKnown RBP5.03□□□□□ -1.6
VPS41-204ENST00000413141 PNRC1Q12796 327 aaPredicted RBP5.03□□□□□ -1.6
VPS41-204ENST00000413141 NSUN5P1Q3KNT7 163 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 AWAT1Q58HT5 328 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 CENPWQ5EE01 88 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 ADAMTSL5Q6ZMM2 481 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 TCF24Q7RTU0 167 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 TVP23CQ96ET8 276 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 IGF2BP2-AS1Q96M15 143 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 SDF2L1Q9HCN8 221 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 MLXQ9UH92 298 aa5.03□□□□□ -1.6
VPS41-204ENST00000413141 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
VPS41-204ENST00000413141 SETD2Q9BYW2 2564 aaPredicted RBP5.02□□□□□ -1.61
VPS41-204ENST00000413141 SERTM2A0A1B0GWG4 89 aa5.02□□□□□ -1.61
VPS41-204ENST00000413141 PGPEP1LA6NFU8 196 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms