RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RRP36Q96EU6 259 aaKnown RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 NRBF2Q96F24 287 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 LINC00615Q96LM1 132 aaPredicted RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC7A5P2Q9GIP4 190 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 IQCGQ9H095 443 aaKnown RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 MRPL17Q9NRX2 175 aaKnown RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 DNAJC12Q9UKB3 198 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 NXT1Q9UKK6 140 aaKnown RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 PLIN4Q96Q06 1357 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 CAMSAP2Q08AD1 1489 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 CD163L1Q9NR16 1453 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 ARHGAP35Q9NRY4 1499 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 SUPT6HQ7KZ85 1726 aaKnown RBP-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 PARP14Q460N5 1801 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 MYH13Q9UKX3 1938 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 TMED7-TICAM2A0A0A6YYA0 188 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 IGHV2-26A0A0B4J1V2 119 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANKRD20A5PA0PJZ0 165 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAB19A4D1S5 217 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 LRP5LA4QPB2 252 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 URADA6NGE7 173 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 A8MWV9 139 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 FAM86B1E9PN63 330 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 PTHP01270 115 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 GSTT2P0CG29 244 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 GSTT2BP0CG30 244 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 IAPPP10997 89 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 HMGA1P17096 107 aaKnown RBP-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAB4AP20338 218 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 DNASE1L1P49184 302 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 TNFSF10P50591 281 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 C21orf59P57076 290 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 UBE2G2P60604 165 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 CXCR4P61073 352 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 GOLGA8DPQ0D2H9 430 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 LAMTOR4Q0VGL1 99 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 C1orf195Q5TG92 126 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 DUPD1Q68J44 220 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 CAVIN1Q6NZI2 390 aaKnown RBP-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 PMF1Q6P1K2 205 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 CLEC19AQ6UXS0 136 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 CYP2G1PQ6ZSU1 146 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 S100A7AQ86SG5 101 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 ZBTB8OSQ8IWT0 167 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 TEX11Q8IYF3 940 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR8H3Q8N146 312 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 PI4KAP1Q8N8J0 262 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 TMEM161BQ8NDZ6 487 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR52E5Q8NH55 327 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 LRRC20Q8TCA0 184 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR51E1Q8TCB6 317 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 TEKT1Q969V4 418 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 IMP4Q96G21 291 aaKnown RBP-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 VSTM2LQ96N03 204 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC38A2Q96QD8 506 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 LINC01587Q99440 93 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 PYM1Q9BRP8 204 aaKnown RBP-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 NIPSNAP3BQ9BS92 247 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 BCL2L10Q9HD36 194 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 TAS2R3Q9NYW6 316 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 PSMC3IPQ9P2W1 217 aaPredicted RBP-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 RABL2BQ9UNT1 228 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 RASD1Q9Y272 281 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 C1orf167Q5SNV9 1468 aa-2.67□□□□□ -2.84
RNU4-88P-201ENST00000411220 CD109Q6YHK3 1445 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 DEPDC5O75140 1603 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 UBR3Q6ZT12 1888 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 PREX1Q8TCU6 1659 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 SHANK2Q9UPX8 1470 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 DHX29Q7Z478 1369 aaKnown RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 C7orf71A4D174 169 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 FABP5P3A8MUU1 101 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 LIN7AO14910 233 aaPredicted RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 STX7O15400 261 aaKnown RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 DCTN3O75935 186 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 BAG2O95816 211 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 C3orf79P0CE67 100 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 CSNK2A2P19784 350 aaPredicted RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 PRDX6P30041 224 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 PYCR1P32322 319 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 CSN1S1P47710 185 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 CCNHP51946 323 aaPredicted RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 LINC00158P58513 81 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 ITGB3BPQ13352 177 aaPredicted RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANKRD1Q15327 319 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC35D2Q76EJ3 337 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 SZRD1Q7Z422 152 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 UBE2J2Q8N2K1 259 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 JAGN1Q8N5M9 183 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR5A2Q8NGI9 324 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 CXorf40AQ8TE69 158 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAB39BQ96DA2 213 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 DRC1Q96MC2 740 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 TRGV9Q99603 122 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 LINC00467Q9BRT7 94 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 HOMER2Q9NSB8 354 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 NOP58Q9Y2X3 529 aaKnown RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 AK6Q9Y3D8 172 aaKnown RBP-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 ADGRL3Q9HAR2 1447 aa-2.68□□□□□ -2.84
RNU4-88P-201ENST00000411220 TRBV7-3A0A075B6L6 115 aa-2.69□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms