RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 ITPR2Q14571 2701 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 A4D1N5 150 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR7C2O60412 319 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 IGHV3-23P01764 117 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 IGHG4P01861 327 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 TRGV3P03979 118 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR10J4P0C629 311 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 ATP5G2Q06055 141 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 IQCJQ1A5X6 159 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 C1orf194Q5T5A4 169 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 Q8WTZ3 238 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 NPFFR1Q9GZQ6 430 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 ZFAND3Q9H8U3 227 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR11H12B2RN74 326 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 PPP5D1E7EU14 171 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 MRPS12O15235 138 aaKnown RBP4.27□□□□□ -1.73
EPHA4-202ENST00000409854 IL4P05112 153 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 NPPCP23582 126 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 PSMB8P28062 276 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 ARL3P36405 182 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 KIAA0141Q14154 515 aaPredicted RBP4.27□□□□□ -1.73
EPHA4-202ENST00000409854 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 ZNF664Q8N3J9 261 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR11H1Q8NG94 326 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR11H2Q8NH07 326 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR4F5Q8NH21 305 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 MS4A10Q96PG2 267 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OR4F4Q96R69 305 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 PAXXQ9BUH6 204 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 SSBP4Q9BWG4 385 aaPredicted RBP4.27□□□□□ -1.73
EPHA4-202ENST00000409854 VCX2Q9H322 139 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 CSPG4Q6UVK1 2322 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 SNRPCP09234 159 aaKnown RBP4.27□□□□□ -1.73
EPHA4-202ENST00000409854 PYYP10082 97 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 GPR183P32249 361 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 MYCNOSP40205 109 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 TPPP2P59282 170 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 UBE2L3P68036 154 aaKnown RBP4.27□□□□□ -1.73
EPHA4-202ENST00000409854 OCIAD2Q56VL3 154 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 MYOZ3Q8TDC0 251 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 YAE1D1Q9NRH1 226 aa4.27□□□□□ -1.73
EPHA4-202ENST00000409854 GGTLC3B5MD39 225 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 H3BQ15 152 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 CLDN34H7C241 214 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 SRP14P37108 136 aaKnown RBP4.26□□□□□ -1.73
EPHA4-202ENST00000409854 CLEC19AQ6UXS0 136 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 S100A7AQ86SG5 101 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 RNF152Q8N8N0 203 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 TMEM190Q8WZ59 177 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 SFRP2Q96HF1 295 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 PARLQ9H300 379 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 MXRA5Q9NR99 2828 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 FLNAP21333 2647 aaKnown RBP4.26□□□□□ -1.73
EPHA4-202ENST00000409854 DNAJC9-AS1A6NH13 148 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 IFITM10A6NMD0 228 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 RAB9AP51151 201 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 PNRC1Q12796 327 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-202ENST00000409854 AWAT1Q58HT5 328 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 TCTEX1D4Q5JR98 221 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 CST9LP1Q5W188 147 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 NIPSNAP3BQ9BS92 247 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 KLK15Q9H2R5 256 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 SDF2L1Q9HCN8 221 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 AURKAIP1Q9NWT8 199 aaPredicted RBP4.26□□□□□ -1.73
EPHA4-202ENST00000409854 CREBBPQ92793 2442 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 A0A0G2JLM5 398 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 CLPSL1A2RUU4 121 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 PHOX2AO14813 284 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 IGLC2P0DOY2 106 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 OR5I1Q13606 314 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 SAMD13Q5VXD3 122 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 SHISA2Q6UWI4 295 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 TOMM20LQ6UXN7 152 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 TVP23CQ96ET8 276 aa4.26□□□□□ -1.73
EPHA4-202ENST00000409854 SCO2A0A1W2PP80 73 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 BMPR1BO00238 502 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 HIST1H1EP10412 219 aaKnown RBP4.25□□□□□ -1.73
EPHA4-202ENST00000409854 RPL15P61313 204 aaKnown RBP4.25□□□□□ -1.73
EPHA4-202ENST00000409854 FOXE3Q13461 319 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 RNF151Q2KHN1 245 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 RAX2Q96IS3 184 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 SMIM7Q9BQ49 75 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 C20orf144Q9BQM9 153 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 ELOVL1Q9BW60 279 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 ESM1Q9NQ30 184 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 SERTAD4Q9NUC0 356 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 RABAC1Q9UI14 185 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 U3KQE9 123 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
EPHA4-202ENST00000409854 A0A087WWC5 75 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 B4DEV8 164 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 ELANEP08246 267 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 S100A7P31151 101 aa4.25□□□□□ -1.73
EPHA4-202ENST00000409854 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms