RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 B3GALT5-AS1P59052 145 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 MST1LQ2TV78 715 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 WDR90Q96KV7 1748 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 MCM3APO60318 1980 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 TRGV1A0A0A0MS02 117 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 H0YGX0 51 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 FOXE3Q13461 319 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 C11orf44Q8N8P7 122 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 KAAG1Q9UBP8 84 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 POLR3KQ9Y2Y1 108 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-203ENST00000409050 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 MUC21A0A140T8X8 626 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 ATP5G1P05496 136 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 ELANEP08246 267 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 ZNF114Q8NC26 417 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 Q8NFD4 153 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 TRAV40A0A0B4J280 105 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 IGFL3Q6UXB1 125 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 EXOC3-AS1Q8N2X6 119 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 LYPD6BQ8NI32 183 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 TMEM243Q9BU79 118 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 SMIM2Q9BVW6 85 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 GON4LQ3T8J9 2241 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 EFNA2O43921 213 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 APOC4P55056 127 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 GAGE2AQ6NT46 116 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 PIP4P2Q8N4L2 257 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 IGFBPL1Q8WX77 278 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 CRIM1Q9NZV1 1036 aa4.93□□□□□ -1.62
SCN1A-203ENST00000409050 SPAG17Q6Q759 2223 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 PSME4Q14997 1843 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 IGKV1D-17A0A075B6S4 117 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 A0A087X0K7 114 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 TRAV8-3A0A0A6YYJ7 113 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 hDV102S1A0JD36 115 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 FCN3O75636 299 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 PRDM6Q9NQX0 595 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 MED14OSP0DP75 135 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 AZU1P20160 251 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 ATP1A1-AS1Q5TC04 95 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 UBE2DNLQ8IWF7 75 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 CEND1Q8N111 149 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 A0A1W2PPM0 123 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 LINC00473A8K010 186 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 IGHV2-70P01814 119 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 RSPO4Q2I0M5 234 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-203ENST00000409050 GFI1BQ5VTD9 330 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 RSPO3Q9BXY4 272 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-203ENST00000409050 V9GYV3 84 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 PLXNA1Q9UIW2 1896 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 C5orf63A6NC05 138 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 SAP30O75446 220 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 CD59P13987 128 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 FOXL2P58012 376 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 C14orf178Q8N769 122 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-203ENST00000409050 HS3ST6Q96QI5 342 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 DSCR8Q96T75 97 aa4.92□□□□□ -1.62
SCN1A-203ENST00000409050 LINC01619G3V211 115 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 K7EP13 123 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 NCR2O95944 276 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 PRR25Q96S07 402 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 TP53TG1Q9Y2A0 90 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 EPOPA6NHQ4 379 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 ZNF561-AS1K7EIQ3 104 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 PDE6GP18545 87 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 TRBV6-1A0A0K0K1D8 114 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 NPYP01303 97 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 HTN3P15516 51 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 C1orf159Q96HA4 380 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 HIGD1BQ9P298 99 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 S4R3C0 116 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 SCN3AQ9NY46 2000 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 IGHV3OR16-10A0A075B7F0 116 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 A0A1W2PPI3 338 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 LTBRP36941 435 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 FGFBP3Q8TAT2 258 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 TMEM126AQ9H061 195 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 KIAA0100Q14667 2235 aaKnown RBP4.91□□□□□ -1.62
SCN1A-203ENST00000409050 ADAMTSL1Q8N6G6 1762 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 MTCL1Q9Y4B5 1905 aaKnown RBP4.91□□□□□ -1.62
SCN1A-203ENST00000409050 ADCYAP1P18509 176 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 CDKN1AP38936 164 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 CDKN1BP46527 198 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 RPL15P61313 204 aaKnown RBP4.91□□□□□ -1.62
SCN1A-203ENST00000409050 Q71RC1 249 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-203ENST00000409050 ANKRD29Q8N6D5 301 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 NKAPP1Q8N9T2 125 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 NDUFA12Q9UI09 145 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 CNTRLQ7Z7A1 2325 aa4.91□□□□□ -1.62
SCN1A-203ENST00000409050 EREGO14944 169 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 KLRD1Q13241 179 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 SPACA3Q8IXA5 215 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 GTSF1LQ9H1H1 148 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 GAGE12JA6NER3 117 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 INS-IGF2F8WCM5 200 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 H3BUX3 64 aa4.9□□□□□ -1.62
SCN1A-203ENST00000409050 GAGE7O76087 117 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms