RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
PARVB-204ENST00000406477 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
PARVB-204ENST00000406477 SMIM27A0A1W2PRY6 76 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 NDUFA4O00483 81 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 HOXA5P20719 270 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 AKR1D1P51857 326 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
PARVB-204ENST00000406477 NOL4LQ96MY1 436 aaPredicted RBP12.53□□□□□ -0.4
PARVB-204ENST00000406477 TRAPPC1Q9Y5R8 145 aa12.53□□□□□ -0.4
PARVB-204ENST00000406477 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 ZNF785A8K8V0 405 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 S100A8P05109 93 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 CFHR3Q02985 330 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 CT83Q5H943 113 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 WDR73Q6P4I2 378 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 NUDT10Q8NFP7 164 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 NUDT11Q96G61 164 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 SLC50A1Q9BRV3 221 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.4
PARVB-204ENST00000406477 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 U3KQE9 123 aa12.52□□□□□ -0.4
PARVB-204ENST00000406477 RPL15P61313 204 aaKnown RBP12.52□□□□□ -0.41
PARVB-204ENST00000406477 PSG3Q16557 428 aa12.52□□□□□ -0.41
PARVB-204ENST00000406477 PRRC2AP48634 2157 aaKnown RBP12.51□□□□□ -0.41
PARVB-204ENST00000406477 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 IZUMO1RA6ND01 250 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 PRR27Q6MZM9 219 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 OR4B1Q8NGF8 309 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 CLEC5AQ9NY25 188 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 SMAD5-AS1Q9Y6J3 95 aa12.51□□□□□ -0.41
PARVB-204ENST00000406477 CR1P17927 2039 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 P01737 135 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 IGHG4P01861 327 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 MT-ND6P03923 174 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
PARVB-204ENST00000406477 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 OR4X2Q8NGF9 303 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 SGK494Q96LW2 274 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
PARVB-204ENST00000406477 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
PARVB-204ENST00000406477 TACC2O95359 2948 aa12.5□□□□□ -0.41
PARVB-204ENST00000406477 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
PARVB-204ENST00000406477 A0A1W2PS18 150 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 A8MWL6 223 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 SLC35B1P78383 322 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 Q6ZS46 218 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 GBGT1Q8N5D6 347 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
PARVB-204ENST00000406477 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
PARVB-204ENST00000406477 LRRK2Q5S007 2527 aa12.48□□□□□ -0.41
PARVB-204ENST00000406477 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
PARVB-204ENST00000406477 SAPCD1Q5SSQ6 148 aa12.48□□□□□ -0.41
PARVB-204ENST00000406477 MRPL53Q96EL3 112 aaKnown RBP12.48□□□□□ -0.41
PARVB-204ENST00000406477 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 TMEM86BQ8N661 226 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 FOXC2Q99958 501 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 GFRA4Q9GZZ7 299 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 KLK15Q9H2R5 256 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
PARVB-204ENST00000406477 TRAV8-1A0A0A6YYK1 113 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 M0R3E3 92 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 PSMB8P28062 276 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
PARVB-204ENST00000406477 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
PARVB-204ENST00000406477 PEF1Q9UBV8 284 aaKnown RBP12.47□□□□□ -0.41
PARVB-204ENST00000406477 RBAKDNA6NC62 111 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 NPIPB6E9PJ23 425 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 CHEK1O14757 476 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 HOXA3O43365 443 aaPredicted RBP12.46□□□□□ -0.42
PARVB-204ENST00000406477 IGHV3-11P01762 117 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 ELANEP08246 267 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 TCL1AP56279 114 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 LINC00518Q8N0U6 118 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 WFDC11Q8NEX6 87 aa12.46□□□□□ -0.42
PARVB-204ENST00000406477 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.42
PARVB-204ENST00000406477 SNURFLB1AK76 121 aa12.45□□□□□ -0.42
PARVB-204ENST00000406477 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
PARVB-204ENST00000406477 S100A2P29034 98 aa12.45□□□□□ -0.42
PARVB-204ENST00000406477 FAM106AQ4KMX7 169 aa12.45□□□□□ -0.42
PARVB-204ENST00000406477 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
PARVB-204ENST00000406477 COX8CQ7Z4L0 72 aa12.45□□□□□ -0.42
PARVB-204ENST00000406477 CIARTQ8N365 385 aaPredicted RBP12.45□□□□□ -0.42
PARVB-204ENST00000406477 MRPL18Q9H0U6 180 aaKnown RBP12.45□□□□□ -0.42
PARVB-204ENST00000406477 XKRY2A2RUG3 117 aa12.44□□□□□ -0.42
PARVB-204ENST00000406477 K7EMT4 169 aa12.44□□□□□ -0.42
PARVB-204ENST00000406477 FOXE3Q13461 319 aa12.44□□□□□ -0.42
PARVB-204ENST00000406477 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms