RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 NUP35Q8NFH5 326 aa14.05□□□□□ -0.16
NRXN1-209ENST00000405581 LIME1Q9H400 295 aa14.05□□□□□ -0.16
NRXN1-209ENST00000405581 IGHV3-53P01767 116 aa14.05□□□□□ -0.16
NRXN1-209ENST00000405581 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
NRXN1-209ENST00000405581 UBE2E2Q96LR5 201 aa14.05□□□□□ -0.16
NRXN1-209ENST00000405581 GFRA4Q9GZZ7 299 aa14.05□□□□□ -0.16
NRXN1-209ENST00000405581 SYNJ2BPP57105 145 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 MEGF9Q9H1U4 602 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 C5orf63A6NC05 138 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 SRSF4Q08170 494 aaKnown RBP14.04□□□□□ -0.16
NRXN1-209ENST00000405581 SAMD5Q5TGI4 173 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 LHFPL4Q7Z7J7 247 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 HIST3H2BBQ8N257 126 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 KLHDC3Q9BQ90 382 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 LMO1P25800 156 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 DEFB131AP59861 70 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 VWA8A3KMH1 1905 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 WNK2Q9Y3S1 2297 aa14.04□□□□□ -0.16
NRXN1-209ENST00000405581 CREBBPQ92793 2442 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 IGHV1-69DA0A0B4J2H0 117 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 ETV2O00321 342 aaPredicted RBP14.03□□□□□ -0.16
NRXN1-209ENST00000405581 IGHV1-69P01742 117 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 Q86TA4 180 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 TRPT1Q86TN4 253 aaKnown RBP14.03□□□□□ -0.16
NRXN1-209ENST00000405581 RNF223E7ERA6 249 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 J3QLI3 93 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 Q5PR19 223 aa14.03□□□□□ -0.16
NRXN1-209ENST00000405581 CACNA1HO95180 2353 aa14.02□□□□□ -0.16
NRXN1-209ENST00000405581 CXCL1P09341 107 aa14.02□□□□□ -0.16
NRXN1-209ENST00000405581 A0A1W2PPI3 338 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 A6NNC1 897 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 COLCA2A8K830 154 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 LEPROTO15243 131 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 C1orf194Q5T5A4 169 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 DNAJC30Q96LL9 226 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 LAMTOR3Q9UHA4 124 aa14.02□□□□□ -0.17
NRXN1-209ENST00000405581 LYL1P12980 280 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 LINC01619G3V211 115 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 FXYD7P58549 80 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 GPR179Q6PRD1 2367 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 MED12Q93074 2177 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 NBASA2RRP1 2371 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 FAM231BA6NCW3 169 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 BCL6BQ8N143 479 aaPredicted RBP14.01□□□□□ -0.17
NRXN1-209ENST00000405581 LY6HO94772 140 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 IGKV1-16P04430 117 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 TMEM158Q8WZ71 300 aa14.01□□□□□ -0.17
NRXN1-209ENST00000405581 PRIMA1Q86XR5 153 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 TIMM21Q9BVV7 248 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 FNDC1Q4ZHG4 1894 aaPredicted RBP14□□□□□ -0.17
NRXN1-209ENST00000405581 ARMS2P0C7Q2 107 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 DEFB130BP0DP73 79 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 DEFB130AP0DP74 79 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 CEACAM8P31997 349 aaPredicted RBP14□□□□□ -0.17
NRXN1-209ENST00000405581 ZNF492Q9P255 531 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 TRAV8-1A0A0A6YYK1 113 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 CFPP27918 469 aa14□□□□□ -0.17
NRXN1-209ENST00000405581 ATP6V0E1O15342 81 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
NRXN1-209ENST00000405581 MCRIP2Q9BUT9 160 aaKnown RBP13.99□□□□□ -0.17
NRXN1-209ENST00000405581 SELENOKQ9Y6D0 94 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 PI4KAP42356 2102 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 IGHV2-70DA0A0C4DH43 119 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 RIPPLY3P57055 190 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 PLXNA3P51805 1871 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 TRAV13-1A0A0B4J241 112 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 GUSBP1Q15486 140 aa13.99□□□□□ -0.17
NRXN1-209ENST00000405581 IL17RELQ6ZVW7 336 aa13.98□□□□□ -0.17
NRXN1-209ENST00000405581 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
NRXN1-209ENST00000405581 TMEM75Q8N9X5 138 aa13.98□□□□□ -0.17
NRXN1-209ENST00000405581 PKDREJQ9NTG1 2253 aa13.98□□□□□ -0.17
NRXN1-209ENST00000405581 HAPLN4Q86UW8 402 aa13.98□□□□□ -0.17
NRXN1-209ENST00000405581 SPAG8Q99932 426 aaPredicted RBP13.98□□□□□ -0.17
NRXN1-209ENST00000405581 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
NRXN1-209ENST00000405581 NEGR1Q7Z3B1 354 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 SYS1-DBNDD2H3BUS1 97 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 CT83Q5H943 113 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 A0A0G2JRQ6 117 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 LOC105371267A0A1B0GV96 52 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 SIGMAR1Q99720 223 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 TMEM14BQ9NUH8 114 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 Q6ZRM9 215 aa13.97□□□□□ -0.17
NRXN1-209ENST00000405581 AMN1Q8IY45 258 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 A0A087WWL8 130 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 INS-IGF2F8WCM5 200 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 DAD1P61803 113 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 IGFL4Q6B9Z1 124 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 KLF12Q9Y4X4 402 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 CFHR2P36980 270 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 RNF144BQ7Z419 303 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 NDUFA4L2Q9NRX3 87 aa13.96□□□□□ -0.17
NRXN1-209ENST00000405581 ANAPC10Q9UM13 185 aa13.96□□□□□ -0.18
NRXN1-209ENST00000405581 USF3Q68DE3 2245 aa13.95□□□□□ -0.18
NRXN1-209ENST00000405581 J3QKU1 62 aa13.95□□□□□ -0.18
NRXN1-209ENST00000405581 NDUFA4O00483 81 aa13.95□□□□□ -0.18
NRXN1-209ENST00000405581 PFN1P07737 140 aaKnown RBP13.95□□□□□ -0.18
NRXN1-209ENST00000405581 RUSC1-AS1Q66K80 236 aa13.95□□□□□ -0.18
NRXN1-209ENST00000405581 ZNF833PQ6ZTB9 187 aa13.95□□□□□ -0.18
NRXN1-209ENST00000405581 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms