RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 IGLV2-23P01705 113 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 CRIP1P50238 77 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 SIGLEC8Q9NYZ4 499 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 SPCS1Q9Y6A9 102 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 AKAP13Q12802 2813 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 A1L4Q6 167 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 EVI2AP22794 236 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 MSRB1Q9NZV6 116 aa7.6□□□□□ -1.19
SMC1B-202ENST00000404354 A0A096LNJ9 63 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 STXBP6Q8NFX7 210 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 PRELID3AQ96N28 172 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 GTSF1LQ9H1H1 148 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 LINC00312Q9Y6C7 94 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 CDX4O14627 284 aaPredicted RBP7.59□□□□□ -1.19
SMC1B-202ENST00000404354 SP9P0CG40 484 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 PLP1P60201 277 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 RIGQ13278 110 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 GTF2H5Q6ZYL4 71 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 C1orf162Q8NEQ5 155 aaPredicted RBP7.59□□□□□ -1.19
SMC1B-202ENST00000404354 RASL11BQ9BPW5 248 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 PSG8Q9UQ74 426 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 AGRNO00468 2067 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 FCER1GP30273 86 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 C8orf46Q8TAG6 207 aa7.59□□□□□ -1.19
SMC1B-202ENST00000404354 TLN1Q9Y490 2541 aaKnown RBP7.59□□□□□ -1.2
SMC1B-202ENST00000404354 IGKV2-40A0A087WW87 121 aaPredicted RBP7.58□□□□□ -1.2
SMC1B-202ENST00000404354 NPIPB5A8MRT5 1133 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 IGKV2D-40P01614 121 aaPredicted RBP7.58□□□□□ -1.2
SMC1B-202ENST00000404354 IGHG3P01860 377 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 IL4P05112 153 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 TWIST1Q15672 202 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 THAP8Q8NA92 274 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 MS4A6AQ9H2W1 248 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 HAX1O00165 279 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 NDUFB3O43676 98 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 GATA1P15976 413 aaPredicted RBP7.58□□□□□ -1.2
SMC1B-202ENST00000404354 CKS2P33552 79 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 UBALD2Q8IYN6 164 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 PRSS33Q8NF86 280 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 ZNF414Q96IQ9 312 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 C9orf118A6NHY6 69 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 FGF6P10767 208 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 Q5PR19 223 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 DEFB104AQ8WTQ1 72 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 CTSZQ9UBR2 303 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 RALYQ9UKM9 306 aaKnown RBP7.58□□□□□ -1.2
SMC1B-202ENST00000404354 INSIG2Q9Y5U4 225 aa7.58□□□□□ -1.2
SMC1B-202ENST00000404354 CEP295Q9C0D2 2601 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 IGKV2D-26A0A0A0MRZ7 120 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 TRAV17A0A0B4J275 112 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 SPAARA0A1B0GVQ0 90 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 A6NDN8 102 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 NPYP01303 97 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 PRSS1P07477 247 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 CT45A10P0DMU9 189 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 CD40P25942 277 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 TMEM186Q96B77 213 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 COL6A6A6NMZ7 2263 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 PPIAL4EA0A075B759 164 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 PPIAL4FP0DN26 164 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 PAX2Q02962 417 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 C1orf185Q5T7R7 199 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 FXYD2P54710 66 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 MRGPRG-AS1Q2M3A8 158 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 CLEC2AQ6UVW9 174 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 GTSCR1Q86UQ5 136 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 WFDC12Q8WWY7 111 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 OTORQ9NRC9 128 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
SMC1B-202ENST00000404354 IGLV3-9A0A075B6K5 115 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 TM4SF5O14894 197 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 SMAD7O15105 426 aaKnown RBP7.56□□□□□ -1.2
SMC1B-202ENST00000404354 AMTNQ6UX39 209 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 IFI27L1Q96BM0 104 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 NGBQ9NPG2 151 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 NHP2Q9NX24 153 aaKnown RBP7.56□□□□□ -1.2
SMC1B-202ENST00000404354 JKAMPQ9P055 326 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 OTOGLQ3ZCN5 2332 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 TMEM265A0A087WTH1 108 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 TMEM189A5PLL7 270 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 K7EM74 188 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 ATP5IP56385 69 aaPredicted RBP7.56□□□□□ -1.2
SMC1B-202ENST00000404354 SEC11AP67812 179 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
SMC1B-202ENST00000404354 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 TRGV9Q99603 122 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 FAM215AQ9Y5M1 114 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 K7EP34 96 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 SPRY2O43597 315 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 IGKV1-17P01599 117 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 ORM1P02763 201 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 PSG3Q16557 428 aa7.56□□□□□ -1.2
SMC1B-202ENST00000404354 SOX21Q9Y651 276 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms