RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 ALKBH7Q9BT30 221 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-205ENST00000402667 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
DNMT3A-205ENST00000402667 ZFP30Q9Y2G7 519 aa13.24□□□□□ -0.29
DNMT3A-205ENST00000402667 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 FAM231BA6NCW3 169 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 NPFFO15130 113 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 PMCHP20382 165 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 C16orf54Q6UWD8 224 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 OR4B1Q8NGF8 309 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 FAM110DQ8TAY7 271 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 TXN2Q99757 166 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 SOX21Q9Y651 276 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 KLF5Q13887 457 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
DNMT3A-205ENST00000402667 ATP6V0E1O15342 81 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 ECSCRQ19T08 205 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 VN1R17PQ8TDU5 208 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 AAMDCQ9H7C9 122 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 CACNA1BQ00975 2339 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 CENPVL3A0A0U1RRI6 287 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 SCGB2A1O75556 95 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 TDRG1Q3Y452 100 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 TEX43Q6ZNM6 134 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 FAM19A2Q8N3H0 131 aa13.22□□□□□ -0.29
DNMT3A-205ENST00000402667 RNF224P0DH78 156 aa13.21□□□□□ -0.29
DNMT3A-205ENST00000402667 KRTDAPP60985 99 aa13.21□□□□□ -0.29
DNMT3A-205ENST00000402667 C15orf32Q32M92 178 aa13.21□□□□□ -0.29
DNMT3A-205ENST00000402667 RPL7P18124 248 aaKnown RBP13.21□□□□□ -0.3
DNMT3A-205ENST00000402667 NIT1Q86X76 327 aa13.21□□□□□ -0.3
DNMT3A-205ENST00000402667 C2orf88Q9BSF0 95 aa13.21□□□□□ -0.3
DNMT3A-205ENST00000402667 RABAC1Q9UI14 185 aa13.21□□□□□ -0.3
DNMT3A-205ENST00000402667 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 LINC01548A6NM66 108 aa13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 CRIP1P50238 77 aa13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 KLK9Q2XQG4 91 aa13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 KLK9Q9UKQ9 250 aa13.2□□□□□ -0.3
DNMT3A-205ENST00000402667 IGHV3-35A0A0C4DH35 117 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 GPR183P32249 361 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 RHOGP84095 191 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 PSG9Q00887 426 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 Q8N976 141 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 IGHV3OR16-8A0A075B7F1 116 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 G3V318 75 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 EREGO14944 169 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 NTF3P20783 257 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 PAX8Q06710 450 aa13.19□□□□□ -0.3
DNMT3A-205ENST00000402667 APOHP02749 345 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 CSN1S1P47710 185 aa13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 LBHQ53QV2 105 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 SMAD5-AS1Q9Y6J3 95 aa13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 HAX1O00165 279 aa13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 CLEC3BP05452 202 aa13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
DNMT3A-205ENST00000402667 HSBP1O75506 76 aa13.17□□□□□ -0.3
DNMT3A-205ENST00000402667 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
DNMT3A-205ENST00000402667 ABCA2Q9BZC7 2435 aa13.17□□□□□ -0.3
DNMT3A-205ENST00000402667 IGHV3OR16-10A0A075B7F0 116 aa13.17□□□□□ -0.3
DNMT3A-205ENST00000402667 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
DNMT3A-205ENST00000402667 IGHV4-61A0A0C4DH41 118 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 C3orf79P0CE67 100 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 IGKV2-40A0A087WW87 121 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 CHEK1O14757 476 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 IGKV2D-40P01614 121 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 RNASEKQ6P5S7 137 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 URB1-AS1Q96HZ7 61 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 CCL19Q99731 98 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 C20orf144Q9BQM9 153 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 PIMREGQ9BSJ6 248 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 VAMP8Q9BV40 100 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 PAM16Q9Y3D7 125 aa13.16□□□□□ -0.3
DNMT3A-205ENST00000402667 CT45A10P0DMU9 189 aa13.15□□□□□ -0.3
DNMT3A-205ENST00000402667 SSTP61278 116 aa13.15□□□□□ -0.3
DNMT3A-205ENST00000402667 TMEM219Q86XT9 240 aa13.15□□□□□ -0.3
DNMT3A-205ENST00000402667 ARL6IP6Q8N6S5 226 aa13.15□□□□□ -0.3
DNMT3A-205ENST00000402667 BORCS7Q96B45 105 aa13.15□□□□□ -0.3
DNMT3A-205ENST00000402667 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
DNMT3A-205ENST00000402667 A0A1B0GUT8 65 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHG4P01861 327 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 S100A7P31151 101 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 IGFL4Q6B9Z1 124 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 CLEC19AQ6UXS0 136 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 SNHG12Q9BXW3 62 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 LOC102724200A0A096LPH7 203 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHV1-69DA0A0B4J2H0 117 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 IGHV1-69P01742 117 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 ARMS2P0C7Q2 107 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
DNMT3A-205ENST00000402667 M0R2Z0 102 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 PIFOQ8TCI5 191 aa13.13□□□□□ -0.31
DNMT3A-205ENST00000402667 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms