RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 UQCRFS1P47985 274 aa13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 TMEM70Q9BUB7 260 aa13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 LOC389332A0A1B0GUA5 103 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 SERTM2A0A1B0GWG4 89 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 IGF2-ASQ6U949 168 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 IGHV3OR16-13A0A075B7E8 117 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 IGHV3-74A0A0B4J1X5 117 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 CCL21O00585 134 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 FAM231DQ6ZW35 169 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 STXBP6Q8NFX7 210 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 HSBP1L1C9JCN9 74 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 ARMS2P0C7Q2 107 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 COX19Q49B96 90 aa13.48□□□□□ -0.25
SNRNP70-202ENST00000401730 K7EP13 123 aa13.47□□□□□ -0.25
SNRNP70-202ENST00000401730 OCIAD2Q56VL3 154 aa13.47□□□□□ -0.25
SNRNP70-202ENST00000401730 MLST8Q9BVC4 326 aa13.47□□□□□ -0.25
SNRNP70-202ENST00000401730 HTR1DP28221 377 aa13.47□□□□□ -0.25
SNRNP70-202ENST00000401730 C8orf49Q96NF6 230 aa13.47□□□□□ -0.25
SNRNP70-202ENST00000401730 B9A039 149 aa13.46□□□□□ -0.25
SNRNP70-202ENST00000401730 Q86TA4 180 aa13.46□□□□□ -0.25
SNRNP70-202ENST00000401730 KAAG1Q9UBP8 84 aa13.46□□□□□ -0.25
SNRNP70-202ENST00000401730 I3L2K1 104 aa13.46□□□□□ -0.25
SNRNP70-202ENST00000401730 NDUFS7O75251 213 aa13.46□□□□□ -0.25
SNRNP70-202ENST00000401730 LTAP01374 205 aa13.46□□□□□ -0.25
SNRNP70-202ENST00000401730 C2orf70A6NJV1 201 aa13.46□□□□□ -0.26
SNRNP70-202ENST00000401730 INS-IGF2F8WCM5 200 aa13.46□□□□□ -0.26
SNRNP70-202ENST00000401730 CRYGBP07316 175 aa13.46□□□□□ -0.26
SNRNP70-202ENST00000401730 JKAMPQ9P055 326 aa13.46□□□□□ -0.26
SNRNP70-202ENST00000401730 TRAV30A0A087WSZ9 112 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 IGHV3-66A0A0C4DH42 116 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 TAX1BP3O14907 124 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 LEPROTL1O95214 131 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 SLC25A34Q6PIV7 304 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 SMIM15Q7Z3B0 74 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 FMC1Q96HJ9 113 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 VPS13CQ709C8 3753 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 IGHV1-24A0A0C4DH33 117 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 K7EIM0 57 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 GNG7O60262 68 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 RBPMS2Q6ZRY4 209 aaKnown RBP13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 TMUB1Q9BVT8 246 aa13.45□□□□□ -0.26
SNRNP70-202ENST00000401730 A0A1B0GXF2 115 aa13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 HLA-DMBP28068 263 aa13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 Q8TAT8 98 aa13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 CHRDL1Q9BU40 450 aa13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 KLF12Q9Y4X4 402 aa13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 SAP30O75446 220 aa13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 MRPL27Q9P0M9 148 aaKnown RBP13.44□□□□□ -0.26
SNRNP70-202ENST00000401730 IGKV2-40A0A087WW87 121 aaPredicted RBP13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 C19orf71A6NCJ1 209 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 ZNF785A8K8V0 405 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 OR2J3O76001 311 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 IGKV2D-40P01614 121 aaPredicted RBP13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 IGLV2-11P01706 119 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 FAM106CPP0CH98 169 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 PSG9Q00887 426 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 RBPJQ06330 500 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 FAM106AQ4KMX7 169 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 FAM71F2Q6NXP2 309 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 WFDC3Q8IUB2 231 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 WIPF2Q8TF74 440 aaPredicted RBP13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 BVES-AS1Q5T3Y7 98 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
SNRNP70-202ENST00000401730 HLA-DRB1P01911 266 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 BPIFA4PQ86YQ2 179 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 MEGF9Q9H1U4 602 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 GAGE12BA1L429 117 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 OTORQ9NRC9 128 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 PSG8Q9UQ74 426 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 TRAV8-6A0A0B4J262 113 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 TMEM213A2RRL7 107 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 SYS1-DBNDD2H3BUS1 97 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 NDPQ00604 133 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 FOXE3Q13461 319 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 ZNF491Q8N8L2 437 aa13.42□□□□□ -0.26
SNRNP70-202ENST00000401730 LIPFP07098 398 aa13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 CRIP1P50238 77 aa13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 NBR2O15453 112 aa13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 TMEM11P17152 192 aa13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 TMEM75Q8N9X5 138 aa13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 DPM3Q9P2X0 92 aa13.41□□□□□ -0.26
SNRNP70-202ENST00000401730 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
SNRNP70-202ENST00000401730 SMKR1H3BMG3 65 aa13.4□□□□□ -0.26
SNRNP70-202ENST00000401730 APOHP02749 345 aaPredicted RBP13.4□□□□□ -0.26
SNRNP70-202ENST00000401730 RAB37Q96AX2 223 aa13.4□□□□□ -0.26
SNRNP70-202ENST00000401730 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
SNRNP70-202ENST00000401730 C8orf31Q8N9H6 132 aa13.4□□□□□ -0.26
SNRNP70-202ENST00000401730 PPIFP30405 207 aaKnown RBP13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 AP1S3Q96PC3 154 aa13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 TMEM191AQ9H0A3 160 aa13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 LOXL1Q08397 574 aaPredicted RBP13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 KLF5Q13887 457 aaPredicted RBP13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 OR8A1Q8NGG7 326 aa13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 PRSS3P2Q8NHM4 247 aa13.39□□□□□ -0.27
SNRNP70-202ENST00000401730 A0A1B0GUT8 65 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms