RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 WNT2BQ93097 391 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 TCF20Q9UGU0 1960 aaKnown RBP7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 ANAPC1Q9H1A4 1944 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 hDV102S1A0JD36 115 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 IGHV2-70P01814 119 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 TIRAPP58753 221 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 F8VVB4 439 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 F8VWA3 439 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 LTBRP36941 435 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 TBX6O95947 436 aaPredicted RBP7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 SH2D6Q7Z4S9 175 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 FOXE3Q13461 319 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 KLF2Q9Y5W3 355 aaPredicted RBP7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 COX7A2LO14548 114 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 RNF138Q8WVD3 245 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 RASL10BQ96S79 203 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 NPYP01303 97 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 C1QL3Q5VWW1 255 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF493Q6ZR52 646 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
CACNA1C-220ENST00000399655 MYF5P13349 255 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 LINC00527Q9UJ94 153 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 LINC00312Q9Y6C7 94 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 A0A1B0GW64 132 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 LINC01619G3V211 115 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 Q6ZUT4 128 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 A0A1W2PPC1 479 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 K7ESM1 405 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 SHISA8B8ZZ34 492 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 ELANEP08246 267 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 RNF183Q96D59 192 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 Q96M66 194 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 IGHV3-35A0A0C4DH35 117 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 UQCRQO14949 82 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 DEFB105AQ8NG35 78 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 C20orf144Q9BQM9 153 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 A0A1W2PRX2 142 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 MSGN1A6NI15 193 aa7.1□□□□□ -1.27
CACNA1C-220ENST00000399655 TMEM178BH3BS89 294 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 MIR17HGQ75NE6 70 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 LOC105371267A0A1B0GV96 52 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 DSCR9P59020 149 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 TFF3Q07654 80 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 CDCP2Q5VXM1 449 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 YPEL4Q96NS1 127 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 PHLPP1O60346 1717 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 KNDC1Q76NI1 1749 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 PRYO14603 147 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 SRXN1Q9BYN0 137 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 MRPL23Q16540 153 aaKnown RBP7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF474Q6S9Z5 364 aaPredicted RBP7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 DEFB121Q5J5C9 76 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 MRPS18BQ9Y676 258 aaKnown RBP7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 A0A0G2JK05 382 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 LTAP01374 205 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 CRYGBP07316 175 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 PATE4P0C8F1 98 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 F5H768 121 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 COLCA1Q6ZS62 124 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 PLA2G10O15496 165 aa7.09□□□□□ -1.27
CACNA1C-220ENST00000399655 IGLC2P0DOY2 106 aa7.09□□□□□ -1.28
CACNA1C-220ENST00000399655 IGLC3P0DOY3 106 aa7.09□□□□□ -1.28
CACNA1C-220ENST00000399655 PRSS41Q7RTY9 318 aa7.09□□□□□ -1.28
CACNA1C-220ENST00000399655 FGFBP3Q8TAT2 258 aa7.09□□□□□ -1.28
CACNA1C-220ENST00000399655 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 AGMATQ9BSE5 352 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 PSPNO60542 156 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 PIK3C2AO00443 1686 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 SPTY2D1-AS1A0A0U1RR47 76 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 FAM223BA6NKX1 122 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 FAM223AQ8IWN6 122 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 TRAV1-1A0A0B4J248 108 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 FOXQ1Q9C009 403 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 PSG4Q00888 419 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 LCN12Q6JVE5 192 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 COX8AP10176 69 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 TRBV19A0A075B6N1 114 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV1OR15-1A0A075B7D0 117 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 NOVP48745 357 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 TRGV9Q99603 122 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 PLXNA4Q9HCM2 1894 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 MPZP25189 248 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 ZNF576Q9H609 170 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 ABCA3Q99758 1704 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 F8VRH5 84 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 ZNF708P17019 499 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 CCL26Q9Y258 94 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV3-48P01763 117 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 PRR30Q53SZ7 412 aaPredicted RBP7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 IGHV3-73A0A0B4J1V6 119 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 TCL1BO95988 128 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
CACNA1C-220ENST00000399655 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms