RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 SHANK2-AS3Q9BTD1 123 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 LY96Q9Y6Y9 160 aa12.16□□□□□ -0.46
UFD1-202ENST00000399523 FAT3Q8TDW7 4589 aa12.15□□□□□ -0.46
UFD1-202ENST00000399523 HPGDSO60760 199 aa12.15□□□□□ -0.46
UFD1-202ENST00000399523 ZNF324O75467 553 aaPredicted RBP12.15□□□□□ -0.46
UFD1-202ENST00000399523 C1QBP02746 253 aa12.15□□□□□ -0.46
UFD1-202ENST00000399523 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
UFD1-202ENST00000399523 RAB11AP62491 216 aa12.15□□□□□ -0.46
UFD1-202ENST00000399523 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
UFD1-202ENST00000399523 GPR132Q9UNW8 380 aa12.15□□□□□ -0.46
UFD1-202ENST00000399523 TRGV2A0A075B6R0 118 aa12.14□□□□□ -0.47
UFD1-202ENST00000399523 TAS2R19P59542 299 aa12.14□□□□□ -0.47
UFD1-202ENST00000399523 LSM3P62310 102 aaKnown RBP12.14□□□□□ -0.47
UFD1-202ENST00000399523 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
UFD1-202ENST00000399523 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 PAX4O43316 350 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 LINC00528Q8N1L1 170 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 PARD6GQ9BYG4 376 aaPredicted RBP12.13□□□□□ -0.47
UFD1-202ENST00000399523 PRR13Q9NZ81 148 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
UFD1-202ENST00000399523 LYZL2Q7Z4W2 148 aa12.12□□□□□ -0.47
UFD1-202ENST00000399523 LRRC20Q8TCA0 184 aa12.12□□□□□ -0.47
UFD1-202ENST00000399523 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
UFD1-202ENST00000399523 KCNIP3Q9Y2W7 256 aa12.12□□□□□ -0.47
UFD1-202ENST00000399523 OXTP01178 125 aa12.11□□□□□ -0.47
UFD1-202ENST00000399523 AKR1C4P17516 323 aa12.11□□□□□ -0.47
UFD1-202ENST00000399523 EVI2AP22794 236 aa12.11□□□□□ -0.47
UFD1-202ENST00000399523 YIPF6Q96EC8 236 aa12.11□□□□□ -0.47
UFD1-202ENST00000399523 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
UFD1-202ENST00000399523 HIGD1AQ9Y241 93 aa12.11□□□□□ -0.47
UFD1-202ENST00000399523 PITX3O75364 302 aa12.1□□□□□ -0.47
UFD1-202ENST00000399523 RAP2BP61225 183 aa12.1□□□□□ -0.47
UFD1-202ENST00000399523 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
UFD1-202ENST00000399523 FAAP20Q6NZ36 180 aa12.1□□□□□ -0.47
UFD1-202ENST00000399523 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
UFD1-202ENST00000399523 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
UFD1-202ENST00000399523 PRO0255Q9UI72 69 aa12.1□□□□□ -0.47
UFD1-202ENST00000399523 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
UFD1-202ENST00000399523 TRAV12-3A0A0B4J271 114 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
UFD1-202ENST00000399523 HYPMO75409 117 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 IAPPP10997 89 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 CXCL2P19875 107 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 PLP1P60201 277 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 Q6ZSA8 131 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 ACOT7LQ6ZUV0 252 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 NEGR1Q7Z3B1 354 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 CCDC190Q86UF4 302 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 WFDC10BQ8IUB3 73 aa12.09□□□□□ -0.47
UFD1-202ENST00000399523 ZNF331Q9NQX6 463 aaPredicted RBP12.09□□□□□ -0.47
UFD1-202ENST00000399523 TRGV1A0A0A0MS02 117 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 FAM25AB3EWG3 89 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 FAM25CB3EWG5 89 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 FAM25GB3EWG6 89 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 CRYBA4P53673 196 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 Q8N814 137 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 ZNF680Q8NEM1 530 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 ZNF431Q8TF32 576 aaPredicted RBP12.08□□□□□ -0.48
UFD1-202ENST00000399523 ST6GAL2Q96JF0 529 aa12.08□□□□□ -0.48
UFD1-202ENST00000399523 PMS2P5A8MQ11 134 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 DISC1C4P0D8 188 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 SPINK4O60575 86 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 AKR1C1Q04828 323 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 SSBP1Q04837 148 aaKnown RBP12.07□□□□□ -0.48
UFD1-202ENST00000399523 SLAQ13239 276 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 CYP2G1PQ6ZSU1 146 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 C10orf126Q8N4M7 172 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 C15orf40Q8WUR7 153 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 ODF3Q96PU9 254 aa12.07□□□□□ -0.48
UFD1-202ENST00000399523 J3KRW8 73 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 IL5P05113 134 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 CRYGDP07320 174 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 OR5G3P0C626 314 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 CT45A10P0DMU9 189 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 LCN15Q6UWW0 184 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 CIB3Q96Q77 187 aaPredicted RBP12.06□□□□□ -0.48
UFD1-202ENST00000399523 SLC50A1Q9BRV3 221 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 Q9H521 79 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 EXTL2Q9UBQ6 330 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 HHLA3Q9XRX5 114 aa12.06□□□□□ -0.48
UFD1-202ENST00000399523 LINC00854A0A1B0GVQ3 168 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 PSCAO43653 123 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 PRAF2O60831 178 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 LINC00869P0C866 280 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 LEPP41159 167 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
UFD1-202ENST00000399523 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
UFD1-202ENST00000399523 SRPXP78539 464 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 ANXA2RQ3ZCQ2 193 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 C4orf46Q504U0 113 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 MZT2AQ6P582 158 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 TEPPQ6URK8 271 aa12.05□□□□□ -0.48
UFD1-202ENST00000399523 ZBTB8BQ8NAP8 495 aaPredicted RBP12.05□□□□□ -0.48
UFD1-202ENST00000399523 MED6O75586 246 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
UFD1-202ENST00000399523 NCS1P62166 190 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms