RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 TMEM158Q8WZ71 300 aa17.37■□□□□ 0.37
ANKRD28-201ENST00000399451 TMEM155Q4W5P6 130 aa17.36■□□□□ 0.37
ANKRD28-201ENST00000399451 TRAV8-1A0A0A6YYK1 113 aa17.36■□□□□ 0.37
ANKRD28-201ENST00000399451 SRSF8Q9BRL6 282 aaKnown RBP17.36■□□□□ 0.37
ANKRD28-201ENST00000399451 IGFL4Q6B9Z1 124 aa17.36■□□□□ 0.37
ANKRD28-201ENST00000399451 KIF26BQ2KJY2 2108 aa17.35■□□□□ 0.37
ANKRD28-201ENST00000399451 RHPN1-AS1Q9BWJ2 59 aa17.35■□□□□ 0.37
ANKRD28-201ENST00000399451 RASL10AQ92737 203 aa17.35■□□□□ 0.37
ANKRD28-201ENST00000399451 CEP290O15078 2479 aa17.35■□□□□ 0.37
ANKRD28-201ENST00000399451 MST1LQ2TV78 715 aa17.34■□□□□ 0.37
ANKRD28-201ENST00000399451 C14orf178Q8N769 122 aaPredicted RBP17.34■□□□□ 0.37
ANKRD28-201ENST00000399451 MPV17L2Q567V2 206 aa17.34■□□□□ 0.37
ANKRD28-201ENST00000399451 E9PQ18 207 aa17.34■□□□□ 0.37
ANKRD28-201ENST00000399451 SHANK2-AS3Q9BTD1 123 aa17.34■□□□□ 0.37
ANKRD28-201ENST00000399451 ITGB1BP1O14713 200 aa17.33■□□□□ 0.37
ANKRD28-201ENST00000399451 MLANAQ16655 118 aa17.33■□□□□ 0.37
ANKRD28-201ENST00000399451 SMKR1H3BMG3 65 aa17.33■□□□□ 0.37
ANKRD28-201ENST00000399451 IGKV1-16P04430 117 aa17.33■□□□□ 0.37
ANKRD28-201ENST00000399451 AMN1Q8IY45 258 aa17.33■□□□□ 0.37
ANKRD28-201ENST00000399451 ZDBF2Q9HCK1 2354 aa17.33■□□□□ 0.36
ANKRD28-201ENST00000399451 PLXNA3P51805 1871 aa17.33■□□□□ 0.36
ANKRD28-201ENST00000399451 ERCC8Q13216 396 aa17.33■□□□□ 0.36
ANKRD28-201ENST00000399451 ZNF664Q8N3J9 261 aa17.32■□□□□ 0.36
ANKRD28-201ENST00000399451 FREM3P0C091 2139 aa17.32■□□□□ 0.36
ANKRD28-201ENST00000399451 GATD1Q8NB37 220 aa17.32■□□□□ 0.36
ANKRD28-201ENST00000399451 LINC01619G3V211 115 aa17.32■□□□□ 0.36
ANKRD28-201ENST00000399451 PAX4O43316 350 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 OVOL3O00110 214 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 DEFB131AP59861 70 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 IGKV1-6A0A0C4DH72 117 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 CEACAM8P31997 349 aaPredicted RBP17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 KIR3DS1Q14943 382 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 TMEM75Q8N9X5 138 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 ALPK2Q86TB3 2170 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 INTS1Q8N201 2190 aaKnown RBP17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 PDE6HQ13956 83 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 DLX4Q92988 240 aaPredicted RBP17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 DAZ1Q9NQZ3 744 aaKnown RBP17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 CR1LQ2VPA4 569 aa17.31■□□□□ 0.36
ANKRD28-201ENST00000399451 PRTN3P24158 256 aa17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 HS3ST6Q96QI5 342 aa17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 SPAG8Q99932 426 aaPredicted RBP17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 F8WEM9 126 aa17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 ZFAND6Q6FIF0 208 aa17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 Q0VG73 95 aa17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 ANAPC10Q9UM13 185 aa17.3■□□□□ 0.36
ANKRD28-201ENST00000399451 F5H768 121 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 LINC00479Q96M42 142 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 DAD1P61803 113 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 ZNF492Q9P255 531 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 A0A1W2PPI3 338 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 GAGE2BQ13066 116 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 GAGE2EQ4V326 116 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 GAGE2DQ9UEU5 116 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 C6orf226Q5I0X4 101 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 C1orf159Q96HA4 380 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 FAM186AA6NE01 2351 aa17.29■□□□□ 0.36
ANKRD28-201ENST00000399451 LGALS1P09382 135 aaKnown RBP17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 SS18Q15532 418 aa17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 ZC2HC1BQ5TFG8 222 aa17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 UBE2V1Q13404 147 aa17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 CHAC1Q9BUX1 264 aa17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 IGHV1-69DA0A0B4J2H0 117 aa17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 IGHV1-69P01742 117 aa17.28■□□□□ 0.36
ANKRD28-201ENST00000399451 TMEM14BQ9NUH8 114 aa17.27■□□□□ 0.36
ANKRD28-201ENST00000399451 C9JQL5 133 aa17.27■□□□□ 0.36
ANKRD28-201ENST00000399451 UBE2E1P51965 193 aa17.27■□□□□ 0.36
ANKRD28-201ENST00000399451 ESDP10768 282 aa17.27■□□□□ 0.36
ANKRD28-201ENST00000399451 C2orf82Q6UX34 121 aa17.27■□□□□ 0.36
ANKRD28-201ENST00000399451 CFHR3Q02985 330 aa17.27■□□□□ 0.35
ANKRD28-201ENST00000399451 A0A087WWL8 130 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 TNFRSF6BO95407 300 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 INS-IGF2F8WCM5 200 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 MCRIP2Q9BUT9 160 aaKnown RBP17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 ARMS2P0C7Q2 107 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 EREGO14944 169 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 TIMM21Q9BVV7 248 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 LIME1Q9H400 295 aa17.26■□□□□ 0.35
ANKRD28-201ENST00000399451 MYMXA0A1B0GTQ4 84 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 IL17RELQ6ZVW7 336 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 CD5LO43866 347 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 OVOL2Q9BRP0 275 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 XCL2Q9UBD3 114 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 C1orf122Q6ZSJ8 110 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 LEPROTO15243 131 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 LMO1P25800 156 aa17.25■□□□□ 0.35
ANKRD28-201ENST00000399451 ZNRD1Q9P1U0 126 aa17.24■□□□□ 0.35
ANKRD28-201ENST00000399451 POLR3KQ9Y2Y1 108 aaPredicted RBP17.24■□□□□ 0.35
ANKRD28-201ENST00000399451 CGB3P0DN86 165 aa17.24■□□□□ 0.35
ANKRD28-201ENST00000399451 SSBP2P81877 361 aaPredicted RBP17.24■□□□□ 0.35
ANKRD28-201ENST00000399451 ATP6V0E1O15342 81 aa17.24■□□□□ 0.35
ANKRD28-201ENST00000399451 TRAV13-1A0A0B4J241 112 aa17.24■□□□□ 0.35
ANKRD28-201ENST00000399451 ETV2O00321 342 aaPredicted RBP17.23■□□□□ 0.35
ANKRD28-201ENST00000399451 NDUFA4L2Q9NRX3 87 aa17.23■□□□□ 0.35
ANKRD28-201ENST00000399451 C8orf49Q96NF6 230 aa17.23■□□□□ 0.35
ANKRD28-201ENST00000399451 LAMTOR3Q9UHA4 124 aa17.23■□□□□ 0.35
ANKRD28-201ENST00000399451 APOC4P55056 127 aa17.23■□□□□ 0.35
ANKRD28-201ENST00000399451 FAM231BA6NCW3 169 aa17.22■□□□□ 0.35
ANKRD28-201ENST00000399451 CACNA1EQ15878 2313 aa17.22■□□□□ 0.35
ANKRD28-201ENST00000399451 IGHV2-70DA0A0C4DH43 119 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms