RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.4■□□□□ 0.06
COL13A1-205ENST00000398978 LOC389332A0A1B0GUA5 103 aa15.4■□□□□ 0.06
COL13A1-205ENST00000398978 APOHP02749 345 aaPredicted RBP15.4■□□□□ 0.06
COL13A1-205ENST00000398978 B9A039 149 aa15.4■□□□□ 0.06
COL13A1-205ENST00000398978 HLA-DRB1P01911 266 aa15.4■□□□□ 0.06
COL13A1-205ENST00000398978 ZNF672Q499Z4 452 aaPredicted RBP15.4■□□□□ 0.06
COL13A1-205ENST00000398978 MPV17L2Q567V2 206 aa15.4■□□□□ 0.06
COL13A1-205ENST00000398978 PSG8Q9UQ74 426 aa15.4■□□□□ 0.06
COL13A1-205ENST00000398978 SERTM2A0A1B0GWG4 89 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 OVOL3O00110 214 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 RBPJQ06330 500 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 FOXE3Q13461 319 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 CDSNQ15517 529 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 ZNF491Q8N8L2 437 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 PTTG1IPP53801 180 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 SIGLEC15Q6ZMC9 328 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 BPIFA4PQ86YQ2 179 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 RNF125Q96EQ8 232 aa15.39■□□□□ 0.05
COL13A1-205ENST00000398978 CT83Q5H943 113 aa15.38■□□□□ 0.05
COL13A1-205ENST00000398978 SMIM12Q96EX1 92 aa15.38■□□□□ 0.05
COL13A1-205ENST00000398978 SHANK2-AS3Q9BTD1 123 aa15.38■□□□□ 0.05
COL13A1-205ENST00000398978 SPTAN1Q13813 2472 aaKnown RBP15.38■□□□□ 0.05
COL13A1-205ENST00000398978 CELSR1Q9NYQ6 3014 aa15.38■□□□□ 0.05
COL13A1-205ENST00000398978 NPIPB6E9PJ23 425 aa15.38■□□□□ 0.05
COL13A1-205ENST00000398978 SCNM1Q9BWG6 230 aa15.38■□□□□ 0.05
COL13A1-205ENST00000398978 A0A1B0GUT8 65 aa15.37■□□□□ 0.05
COL13A1-205ENST00000398978 FOXC1Q12948 553 aa15.37■□□□□ 0.05
COL13A1-205ENST00000398978 C20orf202A1L168 122 aa15.37■□□□□ 0.05
COL13A1-205ENST00000398978 MRPS16Q9Y3D3 137 aaKnown RBP15.37■□□□□ 0.05
COL13A1-205ENST00000398978 COL12A1Q99715 3063 aa15.37■□□□□ 0.05
COL13A1-205ENST00000398978 TMEM213A2RRL7 107 aa15.37■□□□□ 0.05
COL13A1-205ENST00000398978 LOXL1Q08397 574 aaPredicted RBP15.37■□□□□ 0.05
COL13A1-205ENST00000398978 TNFRSF14Q92956 283 aa15.37■□□□□ 0.05
COL13A1-205ENST00000398978 IGKV2-40A0A087WW87 121 aaPredicted RBP15.36■□□□□ 0.05
COL13A1-205ENST00000398978 H3BRN7 92 aa15.36■□□□□ 0.05
COL13A1-205ENST00000398978 GNG7O60262 68 aa15.36■□□□□ 0.05
COL13A1-205ENST00000398978 NCR2O95944 276 aa15.36■□□□□ 0.05
COL13A1-205ENST00000398978 IGKV2D-40P01614 121 aaPredicted RBP15.36■□□□□ 0.05
COL13A1-205ENST00000398978 GFRA4Q9GZZ7 299 aa15.36■□□□□ 0.05
COL13A1-205ENST00000398978 TMEM14CQ9P0S9 112 aa15.36■□□□□ 0.05
COL13A1-205ENST00000398978 MAP1AP78559 2803 aaPredicted RBP15.35■□□□□ 0.05
COL13A1-205ENST00000398978 NCBP2LA6PVI3 153 aaKnown RBP15.35■□□□□ 0.05
COL13A1-205ENST00000398978 LY6LH3BQJ8 138 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 HAX1O00165 279 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 CHCHD1Q96BP2 118 aaKnown RBP15.35■□□□□ 0.05
COL13A1-205ENST00000398978 NUDT3O95989 172 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 Q8TAT8 98 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 ZNF414Q96IQ9 312 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 NDFIP1Q9BT67 221 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 NBR2O15453 112 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 HLA-DMBP28068 263 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 NDPQ00604 133 aa15.35■□□□□ 0.05
COL13A1-205ENST00000398978 PSG3Q16557 428 aa15.34■□□□□ 0.05
COL13A1-205ENST00000398978 NEU4Q8WWR8 484 aaPredicted RBP15.34■□□□□ 0.05
COL13A1-205ENST00000398978 MAP1LC3CQ9BXW4 147 aa15.34■□□□□ 0.05
COL13A1-205ENST00000398978 SOX21Q9Y651 276 aaPredicted RBP15.34■□□□□ 0.05
COL13A1-205ENST00000398978 ANKRD39Q53RE8 183 aa15.34■□□□□ 0.05
COL13A1-205ENST00000398978 COX11Q9Y6N1 276 aa15.34■□□□□ 0.05
COL13A1-205ENST00000398978 IFI27P40305 119 aaPredicted RBP15.33■□□□□ 0.05
COL13A1-205ENST00000398978 DYNAPQ8N1N2 210 aa15.33■□□□□ 0.05
COL13A1-205ENST00000398978 A0A087X0K7 114 aa15.33■□□□□ 0.04
COL13A1-205ENST00000398978 OR2T8A6NH00 312 aa15.33■□□□□ 0.04
COL13A1-205ENST00000398978 LIPFP07098 398 aa15.33■□□□□ 0.04
COL13A1-205ENST00000398978 PRSS3P2Q8NHM4 247 aa15.33■□□□□ 0.04
COL13A1-205ENST00000398978 VPS13CQ709C8 3753 aa15.33■□□□□ 0.04
COL13A1-205ENST00000398978 SMKR1H3BMG3 65 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 HOXB4P17483 251 aaPredicted RBP15.32■□□□□ 0.04
COL13A1-205ENST00000398978 DPM3Q9P2X0 92 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 LYZL1Q6UWQ5 148 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 AMN1Q8IY45 258 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 OR8A1Q8NGG7 326 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 CRXO43186 299 aaPredicted RBP15.32■□□□□ 0.04
COL13A1-205ENST00000398978 OR5AL1P0C617 328 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 TMEM191AQ9H0A3 160 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 AP5S1Q9NUS5 200 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 C1RLQ9NZP8 487 aa15.32■□□□□ 0.04
COL13A1-205ENST00000398978 CBY3A6NI87 242 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 MRPS12O15235 138 aaKnown RBP15.31■□□□□ 0.04
COL13A1-205ENST00000398978 WFDC3Q8IUB2 231 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 ZNF738Q8NE65 137 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 FANCD2OSQ96PS1 177 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 SELENOKQ9Y6D0 94 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 D6R8Y8 96 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 RIGQ13278 110 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 TMEM75Q8N9X5 138 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 CFHR4Q92496 578 aa15.31■□□□□ 0.04
COL13A1-205ENST00000398978 C16orf54Q6UWD8 224 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 RNASE8Q8TDE3 154 aaKnown RBP15.3■□□□□ 0.04
COL13A1-205ENST00000398978 CBY1Q9Y3M2 126 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 HSBP1L1C9JCN9 74 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 FA2HQ7L5A8 372 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 K7EQM0 130 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 FAM162BQ5T6X4 162 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 SLC25A34Q6PIV7 304 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 ORAOV1Q8WV07 137 aa15.3■□□□□ 0.04
COL13A1-205ENST00000398978 FAM231BA6NCW3 169 aa15.29■□□□□ 0.04
COL13A1-205ENST00000398978 CT45A10P0DMU9 189 aa15.29■□□□□ 0.04
COL13A1-205ENST00000398978 VAMP3Q15836 100 aa15.29■□□□□ 0.04
COL13A1-205ENST00000398978 IGHV3OR16-13A0A075B7E8 117 aa15.29■□□□□ 0.04
COL13A1-205ENST00000398978 IGHV3-74A0A0B4J1X5 117 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms