RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 MRPL32Q9BYC8 188 aaKnown RBP10.42□□□□□ -0.74
HDDC2-202ENST00000398153 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
HDDC2-202ENST00000398153 ZNF331Q9NQX6 463 aaPredicted RBP10.42□□□□□ -0.74
HDDC2-202ENST00000398153 ZNF705EA8MWA4 302 aaPredicted RBP10.41□□□□□ -0.74
HDDC2-202ENST00000398153 C4BPBP20851 252 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 PSG9Q00887 426 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 PDE6HQ13956 83 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 ZNF266Q14584 549 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 PSG3Q16557 428 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 GDF5OSQ5U4N7 250 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 FAM78BQ5VT40 261 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 MORN5Q5VZ52 161 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
HDDC2-202ENST00000398153 A0A0J9YWU9 116 aa10.4□□□□□ -0.74
HDDC2-202ENST00000398153 AMBPP02760 352 aa10.4□□□□□ -0.74
HDDC2-202ENST00000398153 MIFP14174 115 aa10.4□□□□□ -0.74
HDDC2-202ENST00000398153 INO80EQ8NBZ0 244 aaPredicted RBP10.4□□□□□ -0.74
HDDC2-202ENST00000398153 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
HDDC2-202ENST00000398153 OR4B1Q8NGF8 309 aa10.4□□□□□ -0.74
HDDC2-202ENST00000398153 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.74
HDDC2-202ENST00000398153 TIMM9Q9Y5J7 89 aa10.4□□□□□ -0.74
HDDC2-202ENST00000398153 HIST1H1EP10412 219 aaKnown RBP10.39□□□□□ -0.75
HDDC2-202ENST00000398153 RNF182Q8N6D2 247 aa10.39□□□□□ -0.75
HDDC2-202ENST00000398153 OR2T35Q8NGX2 323 aa10.39□□□□□ -0.75
HDDC2-202ENST00000398153 NEU1Q99519 415 aa10.39□□□□□ -0.75
HDDC2-202ENST00000398153 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
HDDC2-202ENST00000398153 TRAV5A0A0B4J249 113 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 F6UB75 175 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 H3BQ15 152 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 OR8A1Q8NGG7 326 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 XCL2Q9UBD3 114 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
HDDC2-202ENST00000398153 TRBV19A0A075B6N1 114 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 CNN1P51911 297 aaKnown RBP10.37□□□□□ -0.75
HDDC2-202ENST00000398153 DEFB1P60022 68 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 RHOBP62745 196 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 IGFL4Q6B9Z1 124 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
HDDC2-202ENST00000398153 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
HDDC2-202ENST00000398153 MRPL53Q96EL3 112 aaKnown RBP10.37□□□□□ -0.75
HDDC2-202ENST00000398153 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 WFDC1Q9HC57 220 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 PRELID1Q9Y255 219 aa10.37□□□□□ -0.75
HDDC2-202ENST00000398153 ZNF705FA8MVS1 300 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-202ENST00000398153 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 ZNF705DP0CH99 300 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-202ENST00000398153 ZNF705BP0CI00 300 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-202ENST00000398153 TAS2R45P59539 299 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 ACOT6Q3I5F7 207 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-202ENST00000398153 Q5BKY6 102 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 Q8NAQ8 132 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 PSMG3Q9BT73 122 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-202ENST00000398153 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 TNFSF18Q9UNG2 199 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 X6R8D5 127 aa10.36□□□□□ -0.75
HDDC2-202ENST00000398153 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 SLC17A3O00476 420 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 NBEAP1P0C6P0 100 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 M6PRP20645 277 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 SERF2P84101 59 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 KHDC3LQ587J8 217 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 OR10J6PQ8NGY7 276 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 OR2G3Q8NGZ4 309 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 IGF2BP2-AS1Q96M15 143 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
HDDC2-202ENST00000398153 FXYD6-FXYD2A0A087WZ82 144 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 TAAR5O14804 337 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 MBP02144 154 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 HLA-DMBP28068 263 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
HDDC2-202ENST00000398153 LYPD1Q8N2G4 141 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 C11orf45Q8TAV5 145 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 PAXXQ9BUH6 204 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 PPP1R14DQ9NXH3 145 aa10.34□□□□□ -0.75
HDDC2-202ENST00000398153 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 A0A1W2PPV4 95 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 NDUFB4O95168 129 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 SNRPCP09234 159 aaKnown RBP10.33□□□□□ -0.76
HDDC2-202ENST00000398153 PYYP10082 97 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 RNF141Q8WVD5 230 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
HDDC2-202ENST00000398153 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
HDDC2-202ENST00000398153 G3V3Q6 166 aa10.32□□□□□ -0.76
HDDC2-202ENST00000398153 H3BTX0 84 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms