RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 NRN1Q9NPD7 142 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 PSENENQ9NZ42 101 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 THAP8Q8NA92 274 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 FAM103A1Q9BTL3 118 aaKnown RBP5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 TAAR3PQ9P1P4 343 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 PATE3B3GLJ2 98 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 CECR9P0C854 216 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 COX6A1P12074 109 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 PSMB3P49720 205 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 CDSNQ15517 529 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 KRTAP27-1Q3LI81 207 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF718Q3SXZ3 478 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 LSM10Q969L4 123 aaKnown RBP5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 CACNG5Q9UF02 275 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 EML6Q6ZMW3 1958 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 UQCRQO14949 82 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 TMEM258P61165 79 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF90Q03938 601 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 FAM201AQ5SY85 155 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 Q6ZS92 163 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 IL1F10Q8WWZ1 152 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 OCIAD1Q9NX40 245 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 MPC1Q9Y5U8 109 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 PI4KAP42356 2102 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 IGKV1D-13A0A0B4J2D9 117 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 APOMO95445 188 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 IGKV1-13P0DP09 117 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 CD59P13987 128 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 ETDBQ3ZM63 59 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 SLC25A34Q6PIV7 304 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 C3orf22Q8N5N4 141 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 EEF1AKMT3Q96AZ1 226 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 SDF2L1Q9HCN8 221 aa5.3□□□□□ -1.56
TM9SF4-202ENST00000398022 TRAV26-2A0A0B4J265 109 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 DPRXA6NFQ7 191 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 LY6LH3BQJ8 138 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 OR5AL1P0C617 328 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 OR9G9P0C7N8 305 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 IAPPP10997 89 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 KLF5Q13887 457 aaPredicted RBP5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 PRELID3AQ96N28 172 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 PMCHL2Q9BQD1 86 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 A0A0U1RQV1 116 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 GRIFINA4D1Z8 144 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 H7C1H1 209 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 CCL24O00175 119 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF737O75373 536 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 C18orf32Q8TCD1 76 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 GPHA2Q96T91 129 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 CUBNO60494 3623 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 BUB3O43684 328 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 DUSP14O95147 198 aaKnown RBP5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 NCR2O95944 276 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 GYPAP02724 150 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 CX3CL1P78423 397 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 PLGLB1Q02325 96 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 FOXF2Q12947 444 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 SPANXN5Q5MJ07 72 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 GAGE2AQ6NT46 116 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 TMEM256Q8N2U0 113 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 MRPL20Q9BYC9 149 aaKnown RBP5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 PROK2Q9HC23 129 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 PTPRQQ9UMZ3 2332 aa5.29□□□□□ -1.56
TM9SF4-202ENST00000398022 TRBV6-6A0A0A6YYG2 114 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 MDFIC2A0A1B0GVS7 189 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 IGHV3-9P01782 118 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 PQLC2Q6ZP29 291 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 CYP2G1PQ6ZSU1 146 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF525Q8N782 197 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 OR10G8Q8NGN5 311 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 LINC00526Q96FQ7 95 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 TIMM9Q9Y5J7 89 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 CREBBPQ92793 2442 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 OOSP1A8MZH6 123 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 APOC4P55056 127 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 LOXL3P58215 753 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 B3GALT5-AS1P59052 145 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 GGNQ86UU5 652 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 CIARTQ8N365 385 aaPredicted RBP5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 COMMD5Q9GZQ3 224 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 CXXC4Q9H2H0 198 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 MANBALQ9NQG1 85 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 UBE2L5PA0A1B0GUS4 154 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 TAS2R45P59539 299 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF324BQ6AW86 544 aaPredicted RBP5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 AMTNQ6UX39 209 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 FGFBP3Q8TAT2 258 aa5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 MRPL30Q8TCC3 161 aaKnown RBP5.28□□□□□ -1.56
TM9SF4-202ENST00000398022 CTXND1A0A1B0GTU2 59 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 CRISP2P16562 243 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 COX5AP20674 150 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 ASIPP42127 132 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 FOXA3P55318 350 aaPredicted RBP5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 WFDC2Q14508 124 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 IGFBP7Q16270 282 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 VMA21Q3ZAQ7 101 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms