RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 GLRX5Q86SX6 157 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 MST1LQ2TV78 715 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 ZNF503-AS2A6NEH8 195 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 APOC4P55056 127 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 GAGE12BA1L429 117 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 GAGE7O76087 117 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 GAGE12FP0CL80 117 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 GAGE12GP0CL81 117 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 GAGE12IP0CL82 117 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 SUPT4H1P63272 117 aaKnown RBP9.16□□□□□ -0.94
TTC28-201ENST00000397906 KIAA2026Q5HYC2 2103 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 MORN3Q6PF18 240 aaPredicted RBP9.16□□□□□ -0.94
TTC28-201ENST00000397906 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 PPBPP02775 128 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 IGFBPL1Q8WX77 278 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 H3BUT2 72 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 M0R2P5 195 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 AGMATQ9BSE5 352 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 SLC25A2Q9BXI2 301 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 ZNF561-AS1K7EIQ3 104 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 NCOR1O75376 2440 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 FAM215AQ9Y5M1 114 aa9.16□□□□□ -0.94
TTC28-201ENST00000397906 A0A087WWC5 75 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 C8orf49Q96NF6 230 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 GGTLC3B5MD39 225 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 AZU1P20160 251 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 CEACAM8P31997 349 aaPredicted RBP9.15□□□□□ -0.94
TTC28-201ENST00000397906 SPXQ9BT56 116 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 GNB1LQ9BYB4 327 aa9.15□□□□□ -0.94
TTC28-201ENST00000397906 PIP4P1Q86T03 277 aa9.15□□□□□ -0.95
TTC28-201ENST00000397906 LAMTOR3Q9UHA4 124 aa9.15□□□□□ -0.95
TTC28-201ENST00000397906 ACACAQ13085 2346 aa9.15□□□□□ -0.95
TTC28-201ENST00000397906 DEFB136Q30KP8 78 aa9.15□□□□□ -0.95
TTC28-201ENST00000397906 Q6ZR03 302 aa9.15□□□□□ -0.95
TTC28-201ENST00000397906 WISP1O95388 367 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
TTC28-201ENST00000397906 SPCS1Q9Y6A9 102 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 OR2K2Q8NGT1 345 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 A8MXK9 166 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 J3QLI3 93 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 A0A0G2JRQ6 117 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 A0A1B0GV90 55 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 GHRHP01286 108 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 IFI27L1Q96BM0 104 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 PROK2Q9HC23 129 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 MYLKQ15746 1914 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 EREGO14944 169 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 FNDC4Q9H6D8 234 aaPredicted RBP9.14□□□□□ -0.95
TTC28-201ENST00000397906 RNASE2P10153 161 aaKnown RBP9.14□□□□□ -0.95
TTC28-201ENST00000397906 LRRK1Q38SD2 2015 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 F8WEM9 126 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 NDUFB8O95169 186 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 DIAPH2-AS1Q14236 149 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 DOCK9Q9BZ29 2069 aa9.14□□□□□ -0.95
TTC28-201ENST00000397906 IGHV4-59P01825 116 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 ZNF562Q6V9R5 426 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 TPSG1Q9NRR2 321 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 CACNA1DQ01668 2161 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 DEFB113Q30KQ7 82 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 KIF26AQ9ULI4 1882 aaPredicted RBP9.13□□□□□ -0.95
TTC28-201ENST00000397906 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
TTC28-201ENST00000397906 DEFB112Q30KQ8 113 aa9.13□□□□□ -0.95
TTC28-201ENST00000397906 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
TTC28-201ENST00000397906 ARMS2P0C7Q2 107 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 WT1P19544 449 aaPredicted RBP9.12□□□□□ -0.95
TTC28-201ENST00000397906 MS4A6AQ9H2W1 248 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 HOXB4P17483 251 aaPredicted RBP9.12□□□□□ -0.95
TTC28-201ENST00000397906 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 MCRIP2Q9BUT9 160 aaKnown RBP9.12□□□□□ -0.95
TTC28-201ENST00000397906 VCYO14598 125 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 IGLV2-23P01705 113 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 LHFPL1Q86WI0 220 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 RASL10AQ92737 203 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 LOXP28300 417 aaPredicted RBP9.12□□□□□ -0.95
TTC28-201ENST00000397906 NMSQ5H8A3 153 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 ATRAIDQ6UW56 229 aa9.12□□□□□ -0.95
TTC28-201ENST00000397906 WDR86Q86TI4 376 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 SHANK2-AS3Q9BTD1 123 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 CHCHD1Q96BP2 118 aaKnown RBP9.11□□□□□ -0.95
TTC28-201ENST00000397906 IGLV3-9A0A075B6K5 115 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 MPZP25189 248 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 LIME1Q9H400 295 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 TEX36Q5VZQ5 186 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 TMEM158Q8WZ71 300 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
TTC28-201ENST00000397906 AMN1Q8IY45 258 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 GAGE6Q13070 117 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 LHBP01229 141 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 QRFPP83859 136 aa9.11□□□□□ -0.95
TTC28-201ENST00000397906 TMEM238C9JI98 176 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms