RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C11orf71Q6IPW1 123 aa14.51□□□□□ -0.09
CHRFAM7A-202ENST00000397827 NUDT3O95989 172 aa14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 HIST1H1EP10412 219 aaKnown RBP14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 EXOC3-AS1Q8N2X6 119 aa14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 CAMPP49913 170 aa14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 OR10J3Q5JRS4 329 aa14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 MLST8Q9BVC4 326 aa14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 SSBP4Q9BWG4 385 aaPredicted RBP14.5□□□□□ -0.09
CHRFAM7A-202ENST00000397827 Q71RC1 249 aaPredicted RBP14.49□□□□□ -0.09
CHRFAM7A-202ENST00000397827 TCF24Q7RTU0 167 aa14.49□□□□□ -0.09
CHRFAM7A-202ENST00000397827 TSKUQ8WUA8 353 aa14.49□□□□□ -0.09
CHRFAM7A-202ENST00000397827 Q56UQ5 140 aa14.49□□□□□ -0.09
CHRFAM7A-202ENST00000397827 MUC21A0A0G2JKD1 596 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 MUC21A0A140T8X8 626 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 GNG7O60262 68 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 MUC21Q5SSG8 566 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 SAMD13Q5VXD3 122 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 PRSS57Q6UWY2 283 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 SELENOKQ9Y6D0 94 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 NDUFS7O75251 213 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 GPR6P46095 362 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 DEFB125Q8N687 156 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 FER1L6-AS1Q8NA97 138 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 C17orf77Q96MU5 243 aa14.48□□□□□ -0.09
CHRFAM7A-202ENST00000397827 TRAV8-6A0A0B4J262 113 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 A0A1W2PPR1 153 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 LTAP01374 205 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 CEACAM3P40198 252 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 DYNAPQ8N1N2 210 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 KIR3DL3Q8N743 410 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 FMC1Q96HJ9 113 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 G3V4G9 280 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 PRTN3P24158 256 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 BVES-AS1Q5T3Y7 98 aa14.47□□□□□ -0.09
CHRFAM7A-202ENST00000397827 ODF3BA8MYP8 253 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 OR1N2Q8NGR9 330 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 WIPF2Q8TF74 440 aaPredicted RBP14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 M0R1W7 72 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 NDUFA3O95167 84 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 BCL6BQ8N143 479 aaPredicted RBP14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 NPBQ8NG41 125 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 ASCL2Q99929 193 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 CHRDL1Q9BU40 450 aa14.46□□□□□ -0.09
CHRFAM7A-202ENST00000397827 CACNA1BQ00975 2339 aa14.46□□□□□ -0.1
CHRFAM7A-202ENST00000397827 NCBP2LA6PVI3 153 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 C5orf64Q2M2E5 130 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 GOLT1AQ6ZVE7 132 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 CIARTQ8N365 385 aaPredicted RBP14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 C18orf32Q8TCD1 76 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 NEU4Q8WWR8 484 aaPredicted RBP14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 SRSF8Q9BRL6 282 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 RPP21Q9H633 154 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 IL4P05112 153 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 VMO1Q7Z5L0 202 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 OTORQ9NRC9 128 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 P01737 135 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ZFP36P26651 326 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 RASL11AQ6T310 242 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 PRNTQ86SH4 94 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ZNF491Q8N8L2 437 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 GTSF1Q8WW33 167 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 TMEM14CQ9P0S9 112 aa14.45□□□□□ -0.1
CHRFAM7A-202ENST00000397827 NDPQ00604 133 aa14.44□□□□□ -0.1
CHRFAM7A-202ENST00000397827 LY6DQ14210 128 aa14.44□□□□□ -0.1
CHRFAM7A-202ENST00000397827 PRSS22Q9GZN4 317 aa14.44□□□□□ -0.1
CHRFAM7A-202ENST00000397827 RNF125Q96EQ8 232 aa14.44□□□□□ -0.1
CHRFAM7A-202ENST00000397827 SHANK2-AS3Q9BTD1 123 aa14.44□□□□□ -0.1
CHRFAM7A-202ENST00000397827 C19orf71A6NCJ1 209 aa14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 Q86TA4 180 aa14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 IGLV2-11P01706 119 aa14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 FCGR2BP31994 310 aaPredicted RBP14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 BPIFA4PQ86YQ2 179 aa14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 FANCD2OSQ96PS1 177 aa14.43□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ZFHX3Q15911 3703 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 GAGE10A6NGK3 116 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 IGHV3-23P01764 117 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 DAZAP1Q96EP5 407 aaKnown RBP14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ITPR1Q14643 2758 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 TRBV19A0A075B6N1 114 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 A0A1B0GXF2 115 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 H3BRN7 92 aa14.42□□□□□ -0.1
CHRFAM7A-202ENST00000397827 A8MWL6 223 aa14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 EBLN2Q6P2I7 272 aa14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ARPC1AQ92747 370 aa14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 SPTAN1Q13813 2472 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 COL8A1P27658 744 aa14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 CLEC5AQ9NY25 188 aa14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 PEF1Q9UBV8 284 aaKnown RBP14.41□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ZNF562Q6V9R5 426 aa14.4□□□□□ -0.1
CHRFAM7A-202ENST00000397827 DTX2Q86UW9 622 aa14.4□□□□□ -0.1
CHRFAM7A-202ENST00000397827 IGLV11-55A0A075B6I3 123 aa14.4□□□□□ -0.1
CHRFAM7A-202ENST00000397827 HOXB4P17483 251 aaPredicted RBP14.4□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ATP5L2Q7Z4Y8 100 aa14.4□□□□□ -0.1
CHRFAM7A-202ENST00000397827 ZNF492Q9P255 531 aa14.4□□□□□ -0.1
CHRFAM7A-202ENST00000397827 HLA-DRB1P01911 266 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 HBBP68871 147 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 C12orf54Q6X4T0 127 aa14.39□□□□□ -0.11
CHRFAM7A-202ENST00000397827 SIGLEC15Q6ZMC9 328 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms