RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FAM210AQ96ND0 272 aa17.82■□□□□ 0.44
TSPAN4-202ENST00000397396 SMAD5-AS1Q9Y6J3 95 aa17.82■□□□□ 0.44
TSPAN4-202ENST00000397396 FBN1P35555 2871 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-202ENST00000397396 H3BQ15 152 aa17.81■□□□□ 0.44
TSPAN4-202ENST00000397396 BCL2P10415 239 aa17.81■□□□□ 0.44
TSPAN4-202ENST00000397396 CD33P20138 364 aa17.81■□□□□ 0.44
TSPAN4-202ENST00000397396 AAMDCQ9H7C9 122 aa17.81■□□□□ 0.44
TSPAN4-202ENST00000397396 TRAV2A0A0B4J234 112 aa17.8■□□□□ 0.44
TSPAN4-202ENST00000397396 LINC00862A6NCI5 91 aa17.8■□□□□ 0.44
TSPAN4-202ENST00000397396 DEFB114Q30KQ6 69 aa17.8■□□□□ 0.44
TSPAN4-202ENST00000397396 C9orf66Q5T8R8 295 aa17.8■□□□□ 0.44
TSPAN4-202ENST00000397396 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.8■□□□□ 0.44
TSPAN4-202ENST00000397396 WFDC9Q8NEX5 89 aa17.8■□□□□ 0.44
TSPAN4-202ENST00000397396 RAB19A4D1S5 217 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 RBFOX3A6NFN3 312 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 TSPAN4O14817 238 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 NDUFA5Q16718 116 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 TCEAL7Q9BRU2 100 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 GPR61Q9BZJ8 451 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 VAX2Q9UIW0 290 aa17.79■□□□□ 0.44
TSPAN4-202ENST00000397396 FAM74A7A6NL05 159 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 PAGE4O60829 102 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 UBE2G2P60604 165 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 KRTAP21-3Q3LHN1 58 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 MDFIQ99750 246 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 EIF5A2Q9GZV4 153 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 SMDT1Q9H4I9 107 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 OTORQ9NRC9 128 aa17.78■□□□□ 0.44
TSPAN4-202ENST00000397396 LOC102723971A0A1B0GUV8 181 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 DNASE2O00115 360 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 NDUFS6O75380 124 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 ID1P41134 155 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 HAGHQ16775 308 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 TOR2AQ5JU69 321 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 ZNF506Q5JVG8 444 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 CST9LP1Q5W188 147 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 C16orf92Q96LL3 132 aa17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 SPAG8Q99932 426 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 ZNF331Q9NQX6 463 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-202ENST00000397396 WNK1Q9H4A3 2382 aa17.77■□□□□ 0.43
TSPAN4-202ENST00000397396 ISLRO14498 428 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 IGLV1-51P01701 117 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 RANP62826 216 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 MEF2BQ02080 365 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 PEA15Q15121 130 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 CD300EQ496F6 205 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 LCN12Q6JVE5 192 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 MS4A6AQ9H2W1 248 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 Q9H3A6 140 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 PRELID1Q9Y255 219 aa17.76■□□□□ 0.43
TSPAN4-202ENST00000397396 C11orf94C9JXX5 98 aa17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 H3BTX0 84 aa17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 NDUFB4O95168 129 aa17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 SNRPCP09234 159 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 COMMD7Q86VX2 200 aa17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 TMEM61Q8N0U2 210 aa17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 C17orf77Q96MU5 243 aa17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 YTHDF2Q9Y5A9 579 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-202ENST00000397396 IGKV3-7A0A075B6H7 116 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 OR4C46A6NHA9 309 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 SLC17A3O00476 420 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 PDE6DO43924 150 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 UQCC3Q6UW78 93 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 ARL6IP6Q8N6S5 226 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 CMTM2Q8TAZ6 248 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 RXFP4Q8TDU9 374 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 MRPL53Q96EL3 112 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 COL6A5A8TX70 2615 aa17.74■□□□□ 0.43
TSPAN4-202ENST00000397396 SOCS3O14543 225 aa17.73■□□□□ 0.43
TSPAN4-202ENST00000397396 SNRPD3P62318 126 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-202ENST00000397396 C5orf17Q8NAS9 161 aa17.73■□□□□ 0.43
TSPAN4-202ENST00000397396 DCANP1Q8TF63 244 aa17.73■□□□□ 0.43
TSPAN4-202ENST00000397396 TENM1Q9UKZ4 2725 aa17.73■□□□□ 0.43
TSPAN4-202ENST00000397396 PGPA6NDG6 321 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 GGTLC3B5MD39 225 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 F6UZH7 168 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 CSN1S1P47710 185 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 SUMO1P63165 101 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 PRR31Q5SQ13 230 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 EIF4E3Q8N5X7 224 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 K7EQG2 157 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 ATP5G3P48201 142 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 ICAM4Q14773 271 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 GBGT1Q8N5D6 347 aa17.72■□□□□ 0.43
TSPAN4-202ENST00000397396 SERTM2A0A1B0GWG4 89 aa17.71■□□□□ 0.42
TSPAN4-202ENST00000397396 SLC25A5P05141 298 aaKnown RBP17.71■□□□□ 0.42
TSPAN4-202ENST00000397396 CCDC28AQ8IWP9 274 aa17.71■□□□□ 0.42
TSPAN4-202ENST00000397396 HIST1H2BAQ96A08 127 aa17.71■□□□□ 0.42
TSPAN4-202ENST00000397396 RARRES2Q99969 163 aa17.71■□□□□ 0.42
TSPAN4-202ENST00000397396 TFPI2P48307 235 aa17.7■□□□□ 0.42
TSPAN4-202ENST00000397396 WFDC3Q8IUB2 231 aa17.7■□□□□ 0.42
TSPAN4-202ENST00000397396 EXOC3-AS1Q8N2X6 119 aa17.7■□□□□ 0.42
TSPAN4-202ENST00000397396 RPUSD4Q96CM3 377 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-202ENST00000397396 SELENOKQ9Y6D0 94 aa17.7■□□□□ 0.42
TSPAN4-202ENST00000397396 TRAV8-2A0A0B4J237 113 aa17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 TMEM250H0YL14 139 aa17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 WIPF1O43516 503 aa17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 CMC4P56277 68 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 PSG3Q16557 428 aa17.69■□□□□ 0.42
TSPAN4-202ENST00000397396 GUCA2BQ16661 112 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 546 ms