RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 C1QTNF4Q9BXJ3 329 aa11.45□□□□□ -0.58
COL4A3-202ENST00000396578 LIME1Q9H400 295 aa11.45□□□□□ -0.58
COL4A3-202ENST00000396578 NDPQ00604 133 aa11.45□□□□□ -0.58
COL4A3-202ENST00000396578 PRR31Q5SQ13 230 aa11.45□□□□□ -0.58
COL4A3-202ENST00000396578 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
COL4A3-202ENST00000396578 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
COL4A3-202ENST00000396578 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 DENND4AQ7Z401 1863 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 F8W1H4 67 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
COL4A3-202ENST00000396578 UBL5Q9BZL1 73 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 RPUSD1Q9UJJ7 312 aaKnown RBP11.44□□□□□ -0.58
COL4A3-202ENST00000396578 COLQQ9Y215 455 aaPredicted RBP11.44□□□□□ -0.58
COL4A3-202ENST00000396578 A8MWP6 167 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 IGHV3-53P01767 116 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 ZNF329Q86UD4 541 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 NABP1Q96AH0 204 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
COL4A3-202ENST00000396578 USMG5Q96IX5 58 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 FNDC1Q4ZHG4 1894 aaPredicted RBP11.44□□□□□ -0.58
COL4A3-202ENST00000396578 TCF15Q12870 199 aa11.44□□□□□ -0.58
COL4A3-202ENST00000396578 SPRR3Q9UBC9 169 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 FAM223BA6NKX1 122 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 FAM223AQ8IWN6 122 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 MGAMO43451 1857 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 TRPT1Q86TN4 253 aaKnown RBP11.43□□□□□ -0.58
COL4A3-202ENST00000396578 RNF5Q99942 180 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 ANAPC1Q9H1A4 1944 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 OBSL1O75147 1896 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 MRPL14Q6P1L8 145 aaKnown RBP11.43□□□□□ -0.58
COL4A3-202ENST00000396578 A0A087WWL8 130 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 FNDC10F2Z333 226 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 STPG4Q8N801 248 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
COL4A3-202ENST00000396578 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 LINC00527Q9UJ94 153 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 SRRM5B3KS81 715 aa11.43□□□□□ -0.58
COL4A3-202ENST00000396578 LYNX1G3V0Z9 82 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 LYNX1P0DP58 116 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 DSCR8Q96T75 97 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 H0YJW9 148 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 NTF4P34130 210 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 PDE6HQ13956 83 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 TMEM75Q8N9X5 138 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 HGFACQ04756 655 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 TMEM141Q96I45 108 aa11.42□□□□□ -0.58
COL4A3-202ENST00000396578 TICRRQ7Z2Z1 1910 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 SIP14410 1827 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 IGLV3-12A0A075B6K2 115 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 CSRP2Q16527 193 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 MCRIP2Q9BUT9 160 aaKnown RBP11.41□□□□□ -0.58
COL4A3-202ENST00000396578 DSCR9P59020 149 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 IGKV1-5P01602 117 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 RFNGQ9Y644 331 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 PLXNA3P51805 1871 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 IGKV1-12A0A0C4DH73 117 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 IGKV1D-12P01611 117 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 Q0VG73 95 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 UTF1Q5T230 341 aa11.41□□□□□ -0.58
COL4A3-202ENST00000396578 TRAV3A0A0B4J244 114 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 IL18BPO95998 194 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 C5orf64Q2M2E5 130 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 CRYGSP22914 178 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 FOXF2Q12947 444 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 POLR3KQ9Y2Y1 108 aaPredicted RBP11.4□□□□□ -0.58
COL4A3-202ENST00000396578 GAGE1Q13065 139 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
COL4A3-202ENST00000396578 BUB1B-PAK6H3BSN5 160 aa11.4□□□□□ -0.59
COL4A3-202ENST00000396578 IGKV1-27A0A075B6S5 117 aa11.4□□□□□ -0.59
COL4A3-202ENST00000396578 TMEM178BH3BS89 294 aa11.4□□□□□ -0.59
COL4A3-202ENST00000396578 Q86TA4 180 aa11.4□□□□□ -0.59
COL4A3-202ENST00000396578 CACNA1GO43497 2377 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 TANC2Q9HCD6 1990 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 LYL1P12980 280 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 CEACAM8P31997 349 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-202ENST00000396578 SLAQ13239 276 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 SRSF8Q9BRL6 282 aaKnown RBP11.39□□□□□ -0.59
COL4A3-202ENST00000396578 PMVKQ15126 192 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 TSSC4Q9Y5U2 329 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-202ENST00000396578 EPOPA6NHQ4 379 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 M0R1W7 72 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 FGFBP3Q8TAT2 258 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 LYPD3O95274 346 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 SIPA1L1O43166 1804 aa11.39□□□□□ -0.59
COL4A3-202ENST00000396578 KLRD1Q13241 179 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 ZNF672Q499Z4 452 aaPredicted RBP11.38□□□□□ -0.59
COL4A3-202ENST00000396578 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 IGHG3P01860 377 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 TCTEX1D4Q5JR98 221 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 NCOR1P1Q9H4R4 102 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms