RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 FAM71F2Q6NXP2 309 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 PRNTQ86SH4 94 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 MAP1AP78559 2803 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 LTAP01374 205 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 MRGPRG-AS1Q2M3A8 158 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 EXOC3-AS1Q8N2X6 119 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
CCHCR1-203ENST00000396268 CRYGCP07315 174 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 C8orf46Q8TAG6 207 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 C7orf71A4D174 169 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 RBP4P02753 201 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 ARF6P62330 175 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 RHOGP84095 191 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 SMIM12Q96EX1 92 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 CSTL1Q9H114 145 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 PPBPP02775 128 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 TM4SF20Q53R12 229 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 FAM162BQ5T6X4 162 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 S100A7AQ86SG5 101 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 TMEM133Q9H2Q1 129 aa11.16□□□□□ -0.62
CCHCR1-203ENST00000396268 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 E7EQL1 145 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 NCR2O95944 276 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 PLGLAQ15195 96 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 GPR183P32249 361 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 RNASE6Q93091 150 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 MAP1LC3CQ9BXW4 147 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 SIGLEC9Q9Y336 463 aa11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-203ENST00000396268 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 COX7A1P24310 79 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 DLX6P56179 175 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 CT83Q5H943 113 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 C12orf54Q6X4T0 127 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 USP9XQ93008 2570 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 CIDEAO60543 219 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 Q86TA4 180 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 PPP1R27Q86WC6 154 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 C8orf31Q8N9H6 132 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 OR8A1Q8NGG7 326 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 ZNF492Q9P255 531 aa11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 SOX21Q9Y651 276 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-203ENST00000396268 H3BUT2 72 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 K7ERU9 68 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 HTR1DP28221 377 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 CLUHP3Q96NS8 147 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 F11RQ9Y624 299 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 CSMD1Q96PZ7 3565 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 FAM106CPP0CH98 169 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 FAM106AQ4KMX7 169 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 SRSF12Q8WXF0 261 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
CCHCR1-203ENST00000396268 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 LYNX1G3V0Z9 82 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 TNFRSF13BO14836 293 aaPredicted RBP11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 LYNX1P0DP58 116 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 CNIH1O95406 144 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 GNLYP22749 145 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 BPIFA4PQ86YQ2 179 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
CCHCR1-203ENST00000396268 FBLL1A6NHQ2 334 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 CD5LO43866 347 aa11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 HLA-DRB1P01911 266 aa11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 RPEQ96AT9 228 aa11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 JMJD8Q96S16 334 aa11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 ZNF462Q96JM2 2506 aa11.11□□□□□ -0.63
CCHCR1-203ENST00000396268 TEX22C9J3V5 150 aa11.1□□□□□ -0.63
CCHCR1-203ENST00000396268 LIPFP07098 398 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms