RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 OR1L4Q8NGR5 311 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
CCR9-203ENST00000395963 PRR20EP86478 221 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 PRR20CP86479 221 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 PRR20DP86480 221 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 PRR20BP86481 221 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 PRR20AP86496 221 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 TDRG1Q3Y452 100 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 C4orf3Q8WVX3 66 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 NPIPB3Q92617 1050 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 RNF114Q9Y508 228 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 ZFP92A6NM28 416 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 OR5AU1Q8NGC0 362 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 DUX5Q96PT3 197 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 COX11Q9Y6N1 276 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 ANK3Q12955 4377 aaKnown RBP6.85□□□□□ -1.31
CCR9-203ENST00000395963 TNCP24821 2201 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 ZNF469Q96JG9 3925 aaPredicted RBP6.85□□□□□ -1.31
CCR9-203ENST00000395963 K7ERU9 68 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 RPL19P84098 196 aaKnown RBP6.85□□□□□ -1.31
CCR9-203ENST00000395963 Q56UQ5 140 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 CMTM2Q8TAZ6 248 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 GATAD1Q8WUU5 269 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 MGST2Q99735 147 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 MRPL32Q9BYC8 188 aaKnown RBP6.85□□□□□ -1.31
CCR9-203ENST00000395963 CSTL1Q9H114 145 aa6.85□□□□□ -1.31
CCR9-203ENST00000395963 MRPL27Q9P0M9 148 aaKnown RBP6.85□□□□□ -1.31
CCR9-203ENST00000395963 TSSC4Q9Y5U2 329 aaPredicted RBP6.85□□□□□ -1.31
CCR9-203ENST00000395963 CSPG4Q6UVK1 2322 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 IGKV1D-37A0A075B6S9 117 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
CCR9-203ENST00000395963 NDUFA4O00483 81 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 OR5G3P0C626 314 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 APELAP0DMC3 54 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 SMIM7Q9BQ49 75 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 MANBALQ9NQG1 85 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
CCR9-203ENST00000395963 CSMD1Q96PZ7 3565 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 CD33P20138 364 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 COX19Q49B96 90 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 TCF24Q7RTU0 167 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 NDUFA11Q86Y39 141 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 GPHB5Q86YW7 130 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 CCDC140Q96MF4 163 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 SLC39A9Q9NUM3 307 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 PXMP4Q9Y6I8 212 aa6.84□□□□□ -1.31
CCR9-203ENST00000395963 NOTCH2Q04721 2471 aa6.84□□□□□ -1.32
CCR9-203ENST00000395963 FLNBO75369 2602 aaKnown RBP6.83□□□□□ -1.32
CCR9-203ENST00000395963 ZANQ9Y493 2812 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 LGALS9O00182 355 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 TMEM95Q3KNT9 176 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 OR4C5Q8NGB2 326 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 LAMTOR2Q9Y2Q5 125 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 HIVEP1P15822 2718 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 IGKV1OR2-108A0A075B7D4 117 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 WI2-2373I1.2A0A1W2PRP0 233 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 CBY3A6NI87 242 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 TMEM238C9JI98 176 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 K7EMT4 169 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 BMPR1BO00238 502 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 IGKV1-17P01599 117 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 CTSGP08311 255 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 ARL3P36405 182 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 Q6ZVH6 145 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 STPG3Q8N7X2 389 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 STXBP6Q8NFX7 210 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 TMEM37Q8WXS4 190 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 ZNF586Q9NXT0 402 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 GNG13Q9P2W3 67 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 LINC00527Q9UJ94 153 aa6.83□□□□□ -1.32
CCR9-203ENST00000395963 M0QZ24 198 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
CCR9-203ENST00000395963 RHOBP62745 196 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 ADIRFQ15847 76 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 STPG4Q8N801 248 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 TMEM158Q8WZ71 300 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 RPUSD4Q96CM3 377 aaKnown RBP6.82□□□□□ -1.32
CCR9-203ENST00000395963 GPR82Q96P67 336 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 TXNDC17Q9BRA2 123 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 VPS25Q9BRG1 176 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 CLEC3BP05452 202 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 LINC00869P0C866 280 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 CTRLP40313 264 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 TAS2R45P59539 299 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 RPL23P62829 140 aaKnown RBP6.82□□□□□ -1.32
CCR9-203ENST00000395963 SUMO1P63165 101 aaKnown RBP6.82□□□□□ -1.32
CCR9-203ENST00000395963 MEF2BQ02080 365 aaPredicted RBP6.82□□□□□ -1.32
CCR9-203ENST00000395963 Q0VG73 95 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 FAM106AQ4KMX7 169 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 ZNF329Q86UD4 541 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 NUDT11Q96G61 164 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 KLK15Q9H2R5 256 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 MRPL36Q9P0J6 103 aaKnown RBP6.82□□□□□ -1.32
CCR9-203ENST00000395963 PAM16Q9Y3D7 125 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
CCR9-203ENST00000395963 HYPMO75409 117 aa6.81□□□□□ -1.32
CCR9-203ENST00000395963 GPR183P32249 361 aa6.81□□□□□ -1.32
CCR9-203ENST00000395963 PSMB3P49720 205 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms