RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 MRPL52Q86TS9 123 aaKnown RBP14.04□□□□□ -0.16
UBFD1-201ENST00000395878 DAZ1Q9NQZ3 744 aaKnown RBP14.04□□□□□ -0.16
UBFD1-201ENST00000395878 Q8TCH9 128 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 TMEM14BQ9NUH8 114 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 GATA4P43694 442 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 FXYD7P58549 80 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 ZNF492Q9P255 531 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 AMN1Q8IY45 258 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 C1QTNF4Q9BXJ3 329 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 BPESC1Q9GZL8 116 aa14.04□□□□□ -0.16
UBFD1-201ENST00000395878 PHLDA1Q8WV24 401 aaPredicted RBP14.03□□□□□ -0.16
UBFD1-201ENST00000395878 C1orf147Q96MC9 270 aaPredicted RBP14.03□□□□□ -0.16
UBFD1-201ENST00000395878 THSD7BQ9C0I4 1608 aa14.02□□□□□ -0.16
UBFD1-201ENST00000395878 LINC01356Q8N9X3 169 aa14.02□□□□□ -0.16
UBFD1-201ENST00000395878 TMEM75Q8N9X5 138 aa14.02□□□□□ -0.16
UBFD1-201ENST00000395878 NDUFB8O95169 186 aa14.02□□□□□ -0.17
UBFD1-201ENST00000395878 TDGF1P3P51864 188 aa14.02□□□□□ -0.17
UBFD1-201ENST00000395878 FAM110DQ8TAY7 271 aaPredicted RBP14.02□□□□□ -0.17
UBFD1-201ENST00000395878 FAM231BA6NCW3 169 aa14.02□□□□□ -0.17
UBFD1-201ENST00000395878 NDUFS8O00217 210 aa14.02□□□□□ -0.17
UBFD1-201ENST00000395878 YPEL3P61236 119 aaPredicted RBP14.02□□□□□ -0.17
UBFD1-201ENST00000395878 Q0VG73 95 aa14.02□□□□□ -0.17
UBFD1-201ENST00000395878 LY6HO94772 140 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 ZC2HC1BQ5TFG8 222 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 JPT2Q9H910 190 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 NDUFA4L2Q9NRX3 87 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 A0A087X0K7 114 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 LINC00479Q96M42 142 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 ROS1P08922 2347 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 DLEU1O43261 78 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 UBE2E1P51965 193 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 MPV17L2Q567V2 206 aa14.01□□□□□ -0.17
UBFD1-201ENST00000395878 OVOL3O00110 214 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 UNQ6494/PRO21346Q6UXR6 183 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 KLHL30-AS1Q8NEE0 82 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 ANAPC13Q9BS18 74 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 SMKR1H3BMG3 65 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 PAX4O43316 350 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 CT83Q5H943 113 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 LCNL1Q6ZST4 164 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 TCF20Q9UGU0 1960 aaKnown RBP14□□□□□ -0.17
UBFD1-201ENST00000395878 ERCC8Q13216 396 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 ZNF833PQ6ZTB9 187 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 RNF166Q96A37 237 aaPredicted RBP14□□□□□ -0.17
UBFD1-201ENST00000395878 LIME1Q9H400 295 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 CST9LQ9H4G1 147 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 DOPEY2Q9Y3R5 2298 aa14□□□□□ -0.17
UBFD1-201ENST00000395878 RIPPLY3P57055 190 aa13.99□□□□□ -0.17
UBFD1-201ENST00000395878 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
UBFD1-201ENST00000395878 ARMS2P0C7Q2 107 aa13.99□□□□□ -0.17
UBFD1-201ENST00000395878 NAA38Q9BRA0 125 aaKnown RBP13.99□□□□□ -0.17
UBFD1-201ENST00000395878 KIAA2026Q5HYC2 2103 aa13.99□□□□□ -0.17
UBFD1-201ENST00000395878 PROK2Q9HC23 129 aa13.99□□□□□ -0.17
UBFD1-201ENST00000395878 RIF1Q5UIP0 2472 aaKnown RBP13.98□□□□□ -0.17
UBFD1-201ENST00000395878 C9JQL5 133 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 E9PQ18 207 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.98□□□□□ -0.17
UBFD1-201ENST00000395878 TNFRSF6BO95407 300 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 IGHV3-53P01767 116 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 PAX9P55771 341 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 NPC2P61916 151 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 C11orf68Q9H3H3 251 aaKnown RBP13.98□□□□□ -0.17
UBFD1-201ENST00000395878 MSRB2Q9Y3D2 182 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 MYMXA0A1B0GTQ4 84 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 RPL35AP18077 110 aaKnown RBP13.98□□□□□ -0.17
UBFD1-201ENST00000395878 GATA3P23771 443 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 C1orf159Q96HA4 380 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 MYO7BQ6PIF6 2116 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 PHF3Q92576 2039 aaKnown RBP13.98□□□□□ -0.17
UBFD1-201ENST00000395878 GATD1Q8NB37 220 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 LY6G5BQ8NDX9 201 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 ZNRD1Q9P1U0 126 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 POLEQ07864 2286 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 PI4KAP42356 2102 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 ZNF664Q8N3J9 261 aa13.98□□□□□ -0.17
UBFD1-201ENST00000395878 DLX4Q92988 240 aaPredicted RBP13.98□□□□□ -0.17
UBFD1-201ENST00000395878 PFN1P07737 140 aaKnown RBP13.97□□□□□ -0.17
UBFD1-201ENST00000395878 Q6ZR03 302 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 DEFB104AQ8WTQ1 72 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 A0A087WWL8 130 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 FNDC1Q4ZHG4 1894 aaPredicted RBP13.97□□□□□ -0.17
UBFD1-201ENST00000395878 RLFQ13129 1914 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 ATP6V0E1O15342 81 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 IGFL3Q6UXB1 125 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 TIMM21Q9BVV7 248 aa13.97□□□□□ -0.17
UBFD1-201ENST00000395878 KIR3DS1Q14943 382 aa13.96□□□□□ -0.17
UBFD1-201ENST00000395878 TRPT1Q86TN4 253 aaKnown RBP13.96□□□□□ -0.17
UBFD1-201ENST00000395878 SYNJ2BPP57105 145 aa13.96□□□□□ -0.17
UBFD1-201ENST00000395878 IL17RELQ6ZVW7 336 aa13.96□□□□□ -0.17
UBFD1-201ENST00000395878 UBE2E2Q96LR5 201 aa13.96□□□□□ -0.17
UBFD1-201ENST00000395878 LY6G6EA0A0G2JKS1 128 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 FER1L5A0AVI2 2057 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 PRSS46E5RG02 174 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 C6orf226Q5I0X4 101 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 LINC00311Q8N616 119 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 OVOL2Q9BRP0 275 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 U3KQA8 63 aa13.96□□□□□ -0.18
UBFD1-201ENST00000395878 TRBV19A0A075B6N1 114 aa13.95□□□□□ -0.18
UBFD1-201ENST00000395878 MSMBP08118 114 aa13.95□□□□□ -0.18
UBFD1-201ENST00000395878 CHAC1Q9BUX1 264 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms