RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 FCGR2BP31994 310 aaPredicted RBP11.96□□□□□ -0.49
CPSF7-202ENST00000394888 PSG3Q16557 428 aa11.96□□□□□ -0.5
CPSF7-202ENST00000394888 PGLYRP4Q96LB8 373 aa11.96□□□□□ -0.5
CPSF7-202ENST00000394888 ZFAND3Q9H8U3 227 aa11.96□□□□□ -0.5
CPSF7-202ENST00000394888 HAX1O00165 279 aa11.96□□□□□ -0.5
CPSF7-202ENST00000394888 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.5
CPSF7-202ENST00000394888 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.5
CPSF7-202ENST00000394888 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 HBBP68871 147 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 LINC00173Q6ZV60 143 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 PRNTQ86SH4 94 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 TIMD4Q96H15 378 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 SPTA1P02549 2419 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 PMCHP20382 165 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 CEACAM3P40198 252 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 CAMPP49913 170 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 LYPD1Q8N2G4 141 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 ZNF331Q9NQX6 463 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-202ENST00000394888 AMTP48728 403 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 LCN12Q6JVE5 192 aa11.95□□□□□ -0.5
CPSF7-202ENST00000394888 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
CPSF7-202ENST00000394888 PIFOQ8TCI5 191 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 FAM181BA6NEQ2 426 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 OOSP1A8MZH6 123 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 SIGLECL1Q8N7X8 197 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 CCDC140Q96MF4 163 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 PAM16Q9Y3D7 125 aa11.94□□□□□ -0.5
CPSF7-202ENST00000394888 P01737 135 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 NUTF2P61970 127 aaKnown RBP11.93□□□□□ -0.5
CPSF7-202ENST00000394888 BPIFA4PQ86YQ2 179 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 LOC102724200A0A096LPH7 203 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-202ENST00000394888 LBHQ53QV2 105 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-202ENST00000394888 PSG8Q9UQ74 426 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 PKD1L2Q7Z442 2459 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 OR2T8A6NH00 312 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 ARMS2P0C7Q2 107 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 ZNF80P51504 273 aaPredicted RBP11.93□□□□□ -0.5
CPSF7-202ENST00000394888 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 ZNF502Q8TBZ5 544 aa11.93□□□□□ -0.5
CPSF7-202ENST00000394888 CRXO43186 299 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-202ENST00000394888 SAMD10Q9BYL1 202 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 BPESC1Q9GZL8 116 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 CACNA1AO00555 2505 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 A8MWL6 223 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 UBE2E1P51965 193 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 KRTDAPP60985 99 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 ZNF705FA8MVS1 300 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-202ENST00000394888 ZNF705DP0CH99 300 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-202ENST00000394888 ZNF705BP0CI00 300 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-202ENST00000394888 SAA4P35542 130 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 WNK2Q9Y3S1 2297 aa11.92□□□□□ -0.5
CPSF7-202ENST00000394888 PDE6HQ13956 83 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 C21orf62Q9NYP8 219 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 SOX21Q9Y651 276 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-202ENST00000394888 MFAP4P55083 255 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 PAX8Q06710 450 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 HES1Q14469 280 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 OR4B1Q8NGF8 309 aa11.91□□□□□ -0.5
CPSF7-202ENST00000394888 SPTBN1Q01082 2364 aaKnown RBP11.91□□□□□ -0.5
CPSF7-202ENST00000394888 A0A096LNJ9 63 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 ATP6V0E1O15342 81 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 TMEM11P17152 192 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 EFNA4P52798 201 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 IGFL4Q6B9Z1 124 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 CLEC5AQ9NY25 188 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 ZANQ9Y493 2812 aa11.9□□□□□ -0.5
CPSF7-202ENST00000394888 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.51
CPSF7-202ENST00000394888 GNG7O60262 68 aa11.9□□□□□ -0.51
CPSF7-202ENST00000394888 IGHV4-39P01824 125 aa11.9□□□□□ -0.51
CPSF7-202ENST00000394888 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 FAM110DQ8TAY7 271 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-202ENST00000394888 MED13LQ71F56 2210 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-202ENST00000394888 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
CPSF7-202ENST00000394888 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-202ENST00000394888 ZNF138P52744 262 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 VGLL1Q99990 258 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 UBTD1Q9HAC8 227 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
CPSF7-202ENST00000394888 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 IGHV3OR16-8A0A075B7F1 116 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 G3V318 75 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 GNLYP22749 145 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 COL8A1P27658 744 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 OR4F17Q8NGA8 305 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 TMEM190Q8WZ59 177 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 VAMP8Q9BV40 100 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 U3KQK5 164 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
CPSF7-202ENST00000394888 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1044.5 ms