RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 MRPL32Q9BYC8 188 aaKnown RBP12.37□□□□□ -0.43
PTBP1-204ENST00000394601 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
PTBP1-204ENST00000394601 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
PTBP1-204ENST00000394601 HBBP68871 147 aa12.37□□□□□ -0.43
PTBP1-204ENST00000394601 RBPJQ06330 500 aa12.37□□□□□ -0.43
PTBP1-204ENST00000394601 FAM106AQ4KMX7 169 aa12.37□□□□□ -0.43
PTBP1-204ENST00000394601 Q71RC1 249 aaPredicted RBP12.37□□□□□ -0.43
PTBP1-204ENST00000394601 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
PTBP1-204ENST00000394601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
PTBP1-204ENST00000394601 P01737 135 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 RAB9AP51151 201 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 ERHP84090 104 aaKnown RBP12.36□□□□□ -0.43
PTBP1-204ENST00000394601 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 IGLV1-47P01700 117 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 LINC00322Q6ZN03 302 aaPredicted RBP12.36□□□□□ -0.43
PTBP1-204ENST00000394601 ASCL5Q7RTU5 278 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 FXYD5Q96DB9 178 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 A6NDN8 102 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 MOSP00540 346 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 CNTFRP26992 372 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 CACNG7P62955 275 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 PSG3Q16557 428 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 NPIPB3Q92617 1050 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
PTBP1-204ENST00000394601 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 SLC25A17O43808 307 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 FABP2P12104 132 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 COL8A1P27658 744 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 ETDBQ3ZM63 59 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 COX19Q49B96 90 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 VSTM2AQ8TAG5 236 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 A8MWL6 223 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 TMEM133Q9H2Q1 129 aa12.35□□□□□ -0.43
PTBP1-204ENST00000394601 PEX7O00628 323 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 BMI1P35226 326 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 ZNF329Q86UD4 541 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 C7orf69Q9H7B7 122 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 PRB3Q04118 309 aaPredicted RBP12.34□□□□□ -0.43
PTBP1-204ENST00000394601 CIARTQ8N365 385 aaPredicted RBP12.34□□□□□ -0.43
PTBP1-204ENST00000394601 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 GRAMD2BQ96HH9 432 aa12.34□□□□□ -0.43
PTBP1-204ENST00000394601 K7ENP7 123 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 LIPFP07098 398 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 FCGR2BP31994 310 aaPredicted RBP12.33□□□□□ -0.44
PTBP1-204ENST00000394601 CKS1BP61024 79 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 NHP2Q9NX24 153 aaKnown RBP12.33□□□□□ -0.44
PTBP1-204ENST00000394601 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 A1L4Q6 167 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 C9orf118A6NHY6 69 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 LOXL1Q08397 574 aaPredicted RBP12.33□□□□□ -0.44
PTBP1-204ENST00000394601 C2orf91Q6ZV80 131 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 SPTA1P02549 2419 aa12.33□□□□□ -0.44
PTBP1-204ENST00000394601 APOBEC3AP31941 199 aaPredicted RBP12.32□□□□□ -0.44
PTBP1-204ENST00000394601 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 ADAMTSL5Q6ZMM2 481 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 NEU4Q8WWR8 484 aaPredicted RBP12.32□□□□□ -0.44
PTBP1-204ENST00000394601 A0A1B0GV72 72 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 K7EP34 96 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 MC5RP33032 325 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 WFDC2Q14508 124 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 ARPC1AQ92747 370 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 NPFFR1Q9GZQ6 430 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 PTPRQQ9UMZ3 2332 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 K7EQM0 130 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 NDUFS8O00217 210 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 HSD52Q0P140 79 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
PTBP1-204ENST00000394601 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.31□□□□□ -0.44
PTBP1-204ENST00000394601 SCGB2A2Q13296 93 aa12.31□□□□□ -0.44
PTBP1-204ENST00000394601 C10orf113Q5VZT2 155 aa12.31□□□□□ -0.44
PTBP1-204ENST00000394601 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
PTBP1-204ENST00000394601 LY6LH3BQJ8 138 aa12.31□□□□□ -0.44
PTBP1-204ENST00000394601 GRNP28799 593 aaKnown RBP12.31□□□□□ -0.44
PTBP1-204ENST00000394601 VKORC1Q9BQB6 163 aa12.31□□□□□ -0.44
PTBP1-204ENST00000394601 COX8AP10176 69 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 SRSF12Q8WXF0 261 aaKnown RBP12.3□□□□□ -0.44
PTBP1-204ENST00000394601 AGRNO00468 2067 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 B9A039 149 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
PTBP1-204ENST00000394601 CDSNQ15517 529 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 HCP5Q6MZN7 132 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 SIGLEC9Q9Y336 463 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 BUB1B-PAK6H3BSN5 160 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 LINC00305Q7Z4B0 112 aa12.3□□□□□ -0.44
PTBP1-204ENST00000394601 IGHV1-3A0A0C4DH29 117 aa12.29□□□□□ -0.44
PTBP1-204ENST00000394601 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
PTBP1-204ENST00000394601 H3BMG7 143 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms