RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 FRMD6-AS1P0C7T7 363 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 SAA2P0DJI9 122 aaPredicted RBP4.62□□□□□ -1.67
RFFL-202ENST00000394597 PRSS57Q6UWY2 283 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 FOXC2Q99958 501 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 AAMDCQ9H7C9 122 aa4.62□□□□□ -1.67
RFFL-202ENST00000394597 IGKV1-6A0A0C4DH72 117 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 HBDP02042 147 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 AREGP15514 252 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 PPIFP30405 207 aaKnown RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 ATP5IP56385 69 aaPredicted RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 ATP5G2Q06055 141 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 CENPVQ7Z7K6 275 aaPredicted RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 C11orf53Q8IXP5 236 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 OR4F17Q8NGA8 305 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 MAP1LC3AQ9H492 121 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 TRAV8-1A0A0A6YYK1 113 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 HOXA3O43365 443 aaPredicted RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 TSPAN13O95857 204 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 LYZP61626 148 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 WFDC2Q14508 124 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 ODF1Q14990 250 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 GPR82Q96P67 336 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 MRPL20Q9BYC9 149 aaKnown RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 RPL30P62888 115 aaKnown RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 LYPD2Q6UXB3 125 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 OR5AN1Q8NGI8 311 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 DLX4Q92988 240 aaPredicted RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 CHAC1Q9BUX1 264 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 TP53TG3Q9ULZ0 132 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 K7EN84 100 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 APELAP0DMC3 54 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 CD24P25063 80 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 FCGR2BP31994 310 aaPredicted RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 FXYD7P58549 80 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 HERVK_113P61574 105 aa4.61□□□□□ -1.67
RFFL-202ENST00000394597 MRPL32Q9BYC8 188 aaKnown RBP4.61□□□□□ -1.67
RFFL-202ENST00000394597 PIEZO1Q92508 2521 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TRBV20OR9-2A0A075B6H5 130 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 SHISA9B4DS77 424 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 K7ERJ3 54 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 ORM1P02763 201 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 GNG5P63218 68 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TEX36Q5VZQ5 186 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 MGST2Q99735 147 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TRBV20-1A0A075B6N2 111 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TMEM189A5PLL7 270 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 M0R3E3 92 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 IGHV3-48P01763 117 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 IGHV1-8P0DP01 117 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TCTEX1D4Q5JR98 221 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 HCP5Q6MZN7 132 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 LCNL1Q6ZST4 164 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 C8orf86Q6ZUL3 223 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 GTSCR1Q86UQ5 136 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TEX45Q8NA69 505 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 SCRT2Q9NQ03 307 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 YAE1D1Q9NRH1 226 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 BEX4Q9NWD9 120 aaPredicted RBP4.6□□□□□ -1.67
RFFL-202ENST00000394597 RNF114Q9Y508 228 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 CCDC168Q8NDH2 2452 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 FAM90A9PA6NNJ1 464 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 UPK2O00526 184 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 DLX1P56177 255 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 TMEM155Q4W5P6 130 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 LINC00173Q6ZV60 143 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 GOLT1AQ6ZVE7 132 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 RNF183Q96D59 192 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 PRORYQ9H606 182 aa4.6□□□□□ -1.67
RFFL-202ENST00000394597 PYYP10082 97 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 GRNP28799 593 aaKnown RBP4.59□□□□□ -1.67
RFFL-202ENST00000394597 HOXA4Q00056 320 aaPredicted RBP4.59□□□□□ -1.67
RFFL-202ENST00000394597 C2orf83Q53S99 150 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 SPATA12Q7Z6I5 190 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 TNRC6BQ9UPQ9 1833 aaKnown RBP4.59□□□□□ -1.67
RFFL-202ENST00000394597 MOSP00540 346 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 ADORA2A-AS1P86434 159 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 KLK15Q9H2R5 256 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 SPANXA1Q9NS26 97 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 PGPEP1Q9NXJ5 209 aa4.59□□□□□ -1.67
RFFL-202ENST00000394597 C15orf62A8K5M9 175 aa4.59□□□□□ -1.68
RFFL-202ENST00000394597 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.59□□□□□ -1.68
RFFL-202ENST00000394597 LY6HO94772 140 aa4.59□□□□□ -1.68
RFFL-202ENST00000394597 DPM2O94777 84 aa4.59□□□□□ -1.68
RFFL-202ENST00000394597 ASPHD1Q5U4P2 390 aa4.59□□□□□ -1.68
RFFL-202ENST00000394597 PPDPFLQ8WWR9 84 aa4.59□□□□□ -1.68
RFFL-202ENST00000394597 IGHV3-21A0A0B4J1V1 117 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 TRBV7-9A0A0J9YWB2 115 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 SMIM27A0A1W2PRY6 76 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 C15orf61A6NNL5 157 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 NDUFA3O95167 84 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 LHBP01229 141 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 IGKCP01834 107 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 PF4V1P10720 104 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 DSCR9P59020 149 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 PRB3Q04118 309 aaPredicted RBP4.58□□□□□ -1.68
RFFL-202ENST00000394597 FBXL19-AS1Q494R0 122 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 ZC2HC1BQ5TFG8 222 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms