RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 A0A0A6YYD4 124 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 TMEM240Q5SV17 173 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 IGHV3-73A0A0B4J1V6 119 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 TRGV9Q99603 122 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 CFHR2P36980 270 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 IGHV3OR16-8A0A075B7F1 116 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
USP49-203ENST00000394253 A0A1W2PRX2 142 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
USP49-203ENST00000394253 SPATA31B1PQ5VZV4 182 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 GATA2P23769 480 aaPredicted RBP11.1□□□□□ -0.63
USP49-203ENST00000394253 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 A0A1B0GX51 115 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
USP49-203ENST00000394253 ZNF497Q6ZNH5 498 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 IGKV1D-16P01601 117 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 ATP5G1P05496 136 aa11.1□□□□□ -0.63
USP49-203ENST00000394253 PROP1O75360 226 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 A0A1B0GTI1 187 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 NLRC5Q86WI3 1866 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
USP49-203ENST00000394253 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
USP49-203ENST00000394253 TRBV25-1A0A075B6N4 114 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 FGF16O43320 207 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 NDUFB1O75438 58 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 TAL2Q16559 108 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
USP49-203ENST00000394253 ADAMTSL1Q8N6G6 1762 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 TRAV40A0A0B4J280 105 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 I3L3M4 83 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 U3KQE9 123 aa11.09□□□□□ -0.63
USP49-203ENST00000394253 GZMMP51124 257 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 TMEM256Q8N2U0 113 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 COX8AP10176 69 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
USP49-203ENST00000394253 C15orf32Q32M92 178 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 LHBP01229 141 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.08□□□□□ -0.64
USP49-203ENST00000394253 RMI2Q96E14 147 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 H3BMG7 143 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 CD55P08174 381 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
USP49-203ENST00000394253 SPTSSBQ8NFR3 76 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 EXOC3-AS1Q8N2X6 119 aa11.08□□□□□ -0.64
USP49-203ENST00000394253 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 LINC01465Q8N7H1 131 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 IGFBPL1Q8WX77 278 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 THBDP07204 575 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 CELA2BP08218 269 aaPredicted RBP11.07□□□□□ -0.64
USP49-203ENST00000394253 PRB4P10163 310 aaPredicted RBP11.07□□□□□ -0.64
USP49-203ENST00000394253 LYL1P12980 280 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 PEBP1P30086 187 aaKnown RBP11.07□□□□□ -0.64
USP49-203ENST00000394253 SUPT4H1P63272 117 aaKnown RBP11.07□□□□□ -0.64
USP49-203ENST00000394253 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 SIVA1O15304 175 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 SPSB2Q99619 263 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 Q0VG73 95 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 TMEM133Q9H2Q1 129 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 A0A0G2JK05 382 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 SH2D1AO60880 128 aa11.07□□□□□ -0.64
USP49-203ENST00000394253 IGLC2P0DOY2 106 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 KIAA1549LQ6ZVL6 1849 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 LINC00271P0C7V0 271 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 SLC25A28Q96A46 364 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
USP49-203ENST00000394253 C7orf69Q9H7B7 122 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 DTX4Q9Y2E6 619 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 ZSWIM8A7E2V4 1837 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 MORN2Q502X0 79 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 BSPH1Q075Z2 132 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 CRYBA2P53672 197 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 FHL5Q5TD97 284 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 IGHV3OR16-10A0A075B7F0 116 aa11.06□□□□□ -0.64
USP49-203ENST00000394253 CISD3P0C7P0 127 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 CCL4P13236 92 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 PSMB8P28062 276 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 AMELYQ99218 206 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 PAPPAQ13219 1627 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 FAM236AA0A1B0GUQ0 79 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 FAM236BA0A1B0GV22 79 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 CFPP27918 469 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 TP53TG1Q9Y2A0 90 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 TMEM75Q8N9X5 138 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 C1QTNF5Q9BXJ0 243 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 CTSBP07858 339 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 CFHR4Q92496 578 aa11.05□□□□□ -0.64
USP49-203ENST00000394253 PLXNA4Q9HCM2 1894 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms