RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 DEFA3P59666 94 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 LINC00336Q6ZUF6 198 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 ARL6Q9H0F7 186 aa12.9□□□□□ -0.34
PDLIM7-205ENST00000393551 AZU1P20160 251 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 S100A7P31151 101 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 TAS2R30P59541 319 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 TEPPQ6URK8 271 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 ZNF738Q8NE65 137 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 OR10P1Q8NGE3 313 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 TMEM208Q9BTX3 173 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 ARV1Q9H2C2 271 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 GSKIPQ9P0R6 139 aa12.89□□□□□ -0.35
PDLIM7-205ENST00000393551 CENPXA8MT69 81 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 CCSO14618 274 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 INSP01308 110 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 DAD1P61803 113 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 PSG3Q16557 428 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 LGALS9BQ3B8N2 356 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 Q6ZR54 194 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
PDLIM7-205ENST00000393551 IGLV2-18A0A075B6J9 118 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 BOLA2-SMG1P6H3BVE0 249 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 AGPAT2O15120 278 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 SNRPCP09234 159 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 FCN2Q15485 313 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 MORN5Q5VZ52 161 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 MGST2Q99735 147 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 C20orf85Q9H1P6 137 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 MGAT4CQ9UBM8 478 aa12.87□□□□□ -0.35
PDLIM7-205ENST00000393551 TSPOP30536 169 aa12.86□□□□□ -0.35
PDLIM7-205ENST00000393551 LINC00305Q7Z4B0 112 aa12.86□□□□□ -0.35
PDLIM7-205ENST00000393551 C11orf1Q9H5F2 150 aa12.86□□□□□ -0.35
PDLIM7-205ENST00000393551 PRSS29PA6NIE9 313 aa12.85□□□□□ -0.35
PDLIM7-205ENST00000393551 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
PDLIM7-205ENST00000393551 GGACTQ9BVM4 153 aa12.85□□□□□ -0.35
PDLIM7-205ENST00000393551 LYRM9A8MSI8 78 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 SLC17A3O00476 420 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 GOSR2O14653 212 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 LYRM1O43325 122 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 B2MP61769 119 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 ASAH1Q13510 395 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 RGS21Q2M5E4 152 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 RNF212Q495C1 297 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 ZNF546Q86UE3 836 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 RPUSD4Q96CM3 377 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 ZNF331Q9NQX6 463 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-205ENST00000393551 TRAV6A0A075B6T7 132 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 PRAC2D3DTV9 90 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 H3BTX0 84 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 TCRBP04435 133 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 DEFB130BP0DP73 79 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 DEFB130AP0DP74 79 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 RHOBP62745 196 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 IFITM3Q01628 133 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 LINC01587Q99440 93 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
PDLIM7-205ENST00000393551 PTTG1O95997 202 aa12.82□□□□□ -0.36
PDLIM7-205ENST00000393551 CXCL2P19875 107 aa12.82□□□□□ -0.36
PDLIM7-205ENST00000393551 OPCMLQ14982 345 aa12.82□□□□□ -0.36
PDLIM7-205ENST00000393551 LCN15Q6UWW0 184 aa12.82□□□□□ -0.36
PDLIM7-205ENST00000393551 PARD6GQ9BYG4 376 aaPredicted RBP12.82□□□□□ -0.36
PDLIM7-205ENST00000393551 LSM5Q9Y4Y9 91 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-205ENST00000393551 H3BQ15 152 aa12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 CST7O76096 145 aa12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 IGLC2P0DOY2 106 aa12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 TAS2R60P59551 318 aa12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 S100A7AQ86SG5 101 aa12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 TMEM256Q8N2U0 113 aa12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
PDLIM7-205ENST00000393551 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 FAM24AA6NFZ4 105 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 HTN1P15515 57 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 CDKN1BP46527 198 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 IL15RAQ13261 267 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 MIC13Q5XKP0 118 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 BPIFA4PQ86YQ2 179 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 ZNF431Q8TF32 576 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 NUDT15Q9NV35 164 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 RYR1P21817 5038 aa12.8□□□□□ -0.36
PDLIM7-205ENST00000393551 MUC4Q99102 2169 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 L7N2F9 121 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 CAMLGP49069 296 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 VAMP2P63027 116 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 C10orf113Q5VZT2 155 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 NRARPQ7Z6K4 114 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 C15orf53Q8NAA6 179 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 DNAJC4Q9NNZ3 241 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
PDLIM7-205ENST00000393551 RNF24Q9Y225 148 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms