RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 KLK15Q9H2R5 256 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 HIGD1AQ9Y241 93 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 FCGR2BP31994 310 aaPredicted RBP11.64□□□□□ -0.55
MKS1-202ENST00000393119 CCDC140Q96MF4 163 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 C19orf24Q9BVV8 132 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
MKS1-202ENST00000393119 TRAPPC1Q9Y5R8 145 aa11.64□□□□□ -0.55
MKS1-202ENST00000393119 ANK3Q12955 4377 aaKnown RBP11.63□□□□□ -0.55
MKS1-202ENST00000393119 TRAV34A0A0B4J273 112 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 PDE6DO43924 150 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 GATA3P23771 443 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 ZNF705AQ6ZN79 300 aaPredicted RBP11.63□□□□□ -0.55
MKS1-202ENST00000393119 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 TMEM167BQ9NRX6 74 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 TRBV12-3P01733 135 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 GP9P14770 177 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 Q71RC1 249 aaPredicted RBP11.63□□□□□ -0.55
MKS1-202ENST00000393119 ARL6IP6Q8N6S5 226 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 NHLRC2Q8NBF2 726 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 OCC1Q8TAD7 63 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 RNF125Q96EQ8 232 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 ASCL2Q99929 193 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
MKS1-202ENST00000393119 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 OR5I1Q13606 314 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 OR1L6Q8NGR2 347 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 GNB4Q9HAV0 340 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 TRBV9A0A0B4J1U6 114 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 IGHV3-66A0A0C4DH42 116 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 K7EN84 100 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
MKS1-202ENST00000393119 TOMM40O96008 361 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 PLP1P60201 277 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 C19orf54Q5BKX5 351 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 CMTM2Q8TAZ6 248 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 ZNF502Q8TBZ5 544 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
MKS1-202ENST00000393119 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 IER3P46695 156 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 THYN1Q9P016 225 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 ZFP30Q9Y2G7 519 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 NF1P21359 2839 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 WI2-2373I1.2A0A1W2PRP0 233 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 ZNF320A2RRD8 509 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 NBEAP1P0C6P0 100 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 CD33P20138 364 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
MKS1-202ENST00000393119 ZNF705FA8MVS1 300 aaPredicted RBP11.6□□□□□ -0.55
MKS1-202ENST00000393119 ZNF705DP0CH99 300 aaPredicted RBP11.6□□□□□ -0.55
MKS1-202ENST00000393119 ZNF705BP0CI00 300 aaPredicted RBP11.6□□□□□ -0.55
MKS1-202ENST00000393119 Q8N976 141 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 RNF2Q99496 336 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 PGPA6NDG6 321 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 F6UZH7 168 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 SLC17A3O00476 420 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 HOXA3O43365 443 aaPredicted RBP11.6□□□□□ -0.55
MKS1-202ENST00000393119 FSHBP01225 129 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 IGHG2P01859 326 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 CTRLP40313 264 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 DMRTA1Q5VZB9 504 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
MKS1-202ENST00000393119 J3QLI3 93 aa11.59□□□□□ -0.55
MKS1-202ENST00000393119 TRGV3P03979 118 aa11.59□□□□□ -0.55
MKS1-202ENST00000393119 PPIFP30405 207 aaKnown RBP11.59□□□□□ -0.55
MKS1-202ENST00000393119 TPPP2P59282 170 aa11.59□□□□□ -0.55
MKS1-202ENST00000393119 A0A1W2PRE2 83 aa11.59□□□□□ -0.55
MKS1-202ENST00000393119 APOHP02749 345 aaPredicted RBP11.59□□□□□ -0.55
MKS1-202ENST00000393119 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
MKS1-202ENST00000393119 H3BRN7 92 aa11.58□□□□□ -0.56
MKS1-202ENST00000393119 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
MKS1-202ENST00000393119 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
MKS1-202ENST00000393119 TRAV9-1A0A075B6T8 112 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 HELTA6NFD8 242 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 MYCNOSP40205 109 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 COL5A1-AS1Q5SY13 56 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 C11orf52Q96A22 123 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 IGF1P05019 195 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 PF4V1P10720 104 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 Q0VG73 95 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 PRSS57Q6UWY2 283 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 Q9H3A6 140 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 RNF114Q9Y508 228 aa11.57□□□□□ -0.56
MKS1-202ENST00000393119 TRAV8-1A0A0A6YYK1 113 aa11.56□□□□□ -0.56
MKS1-202ENST00000393119 ISLRO14498 428 aa11.56□□□□□ -0.56
MKS1-202ENST00000393119 SERF1AO75920 110 aa11.56□□□□□ -0.56
MKS1-202ENST00000393119 SLC25A5P05141 298 aaKnown RBP11.56□□□□□ -0.56
MKS1-202ENST00000393119 ATP5G2Q06055 141 aa11.56□□□□□ -0.56
MKS1-202ENST00000393119 VN1R17PQ8TDU5 208 aa11.56□□□□□ -0.56
MKS1-202ENST00000393119 SMR3AQ99954 134 aa11.56□□□□□ -0.56
MKS1-202ENST00000393119 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms