RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 AMY1AP04745 511 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 CRYGBP07316 175 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 UQCRFS1P47985 274 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 AMTP48728 403 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 SLC35B1P78383 322 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 TCTEX1D4Q5JR98 221 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 MRPL54Q6P161 138 aaKnown RBP7.69□□□□□ -1.18
COL6A3-204ENST00000392003 LINC00479Q96M42 142 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 DPM3Q9P2X0 92 aa7.69□□□□□ -1.18
COL6A3-204ENST00000392003 A0A1W2PRD5 423 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 A0A1W2PRF3 423 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 A0A1W2PRM7 423 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 SCGB2A1O75556 95 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 LYZP61626 148 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 NEGR1Q7Z3B1 354 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 C8orf46Q8TAG6 207 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 RASL11BQ9BPW5 248 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 IZUMO1RA6ND01 250 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 GAGE10A6NGK3 116 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 OR11H12B2RN74 326 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 TIMM23O14925 209 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 HIST1H1EP10412 219 aaKnown RBP7.68□□□□□ -1.18
COL6A3-204ENST00000392003 HES1Q14469 280 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 OR11H1Q8NG94 326 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 OR11H2Q8NH07 326 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 PLXNB1O43157 2135 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 ABCA1O95477 2261 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 SERF1AO75920 110 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 IGLV2-8P01709 118 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 MFAP2P55001 183 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 ATP5G2Q06055 141 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 MRGPRG-AS1Q2M3A8 158 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 C19orf35Q6ZS72 473 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 HILPDAQ9Y5L2 63 aa7.68□□□□□ -1.18
COL6A3-204ENST00000392003 NAV3Q8IVL0 2385 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 GNG5P63218 68 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 ZNF562Q6V9R5 426 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 SSBP3Q9BWW4 388 aaPredicted RBP7.67□□□□□ -1.18
COL6A3-204ENST00000392003 MRPS16Q9Y3D3 137 aaKnown RBP7.67□□□□□ -1.18
COL6A3-204ENST00000392003 ZZEF1O43149 2961 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 SMIM27A0A1W2PRY6 76 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 H0Y8G0 127 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 NUDT3O95989 172 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 FAM231DQ6ZW35 169 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 SIGLECL1Q8N7X8 197 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 GRAMD2BQ96HH9 432 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 JMJD8Q96S16 334 aa7.67□□□□□ -1.18
COL6A3-204ENST00000392003 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 Q0VG73 95 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 PVRIGQ6DKI7 326 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 VPREB3Q9UKI3 123 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 NBR2O15453 112 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 ZNF253O75346 499 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 APCSP02743 223 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 KLHDC1Q8N7A1 406 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 GPR82Q96P67 336 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 SSBP4Q9BWG4 385 aaPredicted RBP7.66□□□□□ -1.18
COL6A3-204ENST00000392003 FAM208BQ5VWN6 2430 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 FAM231BA6NCW3 169 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 NPIPB5A8MRT5 1133 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 M0R1W7 72 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 UFSP1Q6NVU6 142 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 TMEM136Q6ZRR5 245 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 GTF2H5Q6ZYL4 71 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 LY6G5BQ8NDX9 201 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 ZFYVE26Q68DK2 2539 aa7.66□□□□□ -1.18
COL6A3-204ENST00000392003 CA1P00915 261 aaPredicted RBP7.65□□□□□ -1.18
COL6A3-204ENST00000392003 Q9H3A6 140 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 TRAV25A0A0B4J276 109 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 LY6LH3BQJ8 138 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 FRMD6-AS1P0C7T7 363 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 OR11H6Q8NGC7 330 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 FMC1Q96HJ9 113 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 SGK494Q96LW2 274 aa7.65□□□□□ -1.18
COL6A3-204ENST00000392003 H3BTX0 84 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 SRIP30626 198 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 OR10J3Q5JRS4 329 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 RASL11AQ6T310 242 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 DEFB125Q8N687 156 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 NDFIP1Q9BT67 221 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 GNB4Q9HAV0 340 aa7.65□□□□□ -1.19
COL6A3-204ENST00000392003 FOXE3Q13461 319 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 BVES-AS1Q5T3Y7 98 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 MYO18BQ8IUG5 2567 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 PRTN3P24158 256 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 CD300EQ496F6 205 aaPredicted RBP7.64□□□□□ -1.19
COL6A3-204ENST00000392003 TSKUQ8WUA8 353 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 SLC25A39Q9BZJ4 359 aaPredicted RBP7.64□□□□□ -1.19
COL6A3-204ENST00000392003 NPFFR1Q9GZQ6 430 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 OTORQ9NRC9 128 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 TMEM8BA6NDV4 472 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 A8MWL6 223 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 I3L2K1 104 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 P01737 135 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 GP9P14770 177 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 MYCNOSP40205 109 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 KLRD1Q13241 179 aa7.64□□□□□ -1.19
COL6A3-204ENST00000392003 RUSC1-AS1Q66K80 236 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms