RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 ZNF415Q09FC8 603 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 TMEM170AQ8WVE7 144 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 TRGV9Q99603 122 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 HOXA5P20719 270 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 FAM169BQ8N8A8 192 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 TMEM14BQ9NUH8 114 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 TRAV12-2A0A075B6T6 113 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 SLC50A1Q9BRV3 221 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 IGHV2-70DA0A0C4DH43 119 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 J3QR89 54 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 IGLV3-1P01715 115 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 ZNF833PQ6ZTB9 187 aa11.69□□□□□ -0.54
PSME4-201ENST00000389993 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 TRAV21A0A0B4J279 112 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 C14orf178Q8N769 122 aaPredicted RBP11.68□□□□□ -0.54
PSME4-201ENST00000389993 FAM208BQ5VWN6 2430 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 APOMO95445 188 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 NUP210LQ5VU65 1888 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
PSME4-201ENST00000389993 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 LINC00614P0C842 121 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 CACNG7P62955 275 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 Q6ZS49 121 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 SLC25A2Q9BXI2 301 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 NCKAP5O14513 1909 aa11.68□□□□□ -0.54
PSME4-201ENST00000389993 CFHR2P36980 270 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 NDUFA4L2Q9NRX3 87 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 TRGV4A0A0C4DH28 118 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 LINC00587B1AMM8 73 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
PSME4-201ENST00000389993 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
PSME4-201ENST00000389993 CR1LQ2VPA4 569 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 SLX1AQ9BQ83 275 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 NAA38Q9BRA0 125 aaKnown RBP11.66□□□□□ -0.54
PSME4-201ENST00000389993 ADORA2A-AS1P86434 159 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 GTSCR1Q86UQ5 136 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 ST20Q9HBF5 79 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 A0A1B0GV72 72 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 DSCR9P59020 149 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 TRGV1A0A0A0MS02 117 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 LYL1P12980 280 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 MSMPQ1L6U9 139 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 Q8TCH9 128 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 GATA4P43694 442 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
PSME4-201ENST00000389993 UBE2E1P51965 193 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 PSG3Q16557 428 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 TEX36Q5VZQ5 186 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 TOMM40O96008 361 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 PEF1Q9UBV8 284 aaKnown RBP11.65□□□□□ -0.54
PSME4-201ENST00000389993 TMEM213A2RRL7 107 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 TYMSP04818 313 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 DEFB131AP59861 70 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 ZNF114Q8NC26 417 aa11.65□□□□□ -0.54
PSME4-201ENST00000389993 NCOA6Q14686 2063 aaPredicted RBP11.65□□□□□ -0.54
PSME4-201ENST00000389993 IGHV4-38-2P0DP08 117 aa11.65□□□□□ -0.55
PSME4-201ENST00000389993 TMEM101Q96IK0 257 aa11.65□□□□□ -0.55
PSME4-201ENST00000389993 RCHY1Q96PM5 261 aa11.65□□□□□ -0.55
PSME4-201ENST00000389993 PAX1P15863 534 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 HIST1H2BLQ99880 126 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 XCL2Q9UBD3 114 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.64□□□□□ -0.55
PSME4-201ENST00000389993 IGHV4-59P01825 116 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 HOXB4P17483 251 aaPredicted RBP11.64□□□□□ -0.55
PSME4-201ENST00000389993 TRAV26-2A0A0B4J265 109 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 C22orf34Q6ZV56 151 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 hDV102S1A0JD36 115 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 TMEM8BA6NDV4 472 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 OR11H2Q8NH07 326 aa11.64□□□□□ -0.55
PSME4-201ENST00000389993 PTPRQQ9UMZ3 2332 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 PIEZO2Q9H5I5 2752 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
PSME4-201ENST00000389993 HIST2H2BCQ6DN03 193 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 CFPP27918 469 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 DMRT1Q9Y5R6 373 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 IGHV4-61A0A0C4DH41 118 aa11.63□□□□□ -0.55
PSME4-201ENST00000389993 ZNF562Q6V9R5 426 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 AMBPP02760 352 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 UTF1Q5T230 341 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
PSME4-201ENST00000389993 ARMS2P0C7Q2 107 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 DEFB130BP0DP73 79 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 DEFB130AP0DP74 79 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms