RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 SPCS1Q9Y6A9 102 aa14.09□□□□□ -0.15
SQSTM1-202ENST00000389805 A6NDN8 102 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 DLL1O00548 723 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 TNFRSF13BO14836 293 aaPredicted RBP14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 OR1L8Q8NGR8 309 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 TPSG1Q9NRR2 321 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 ZNF207O43670 478 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 FGF6P10767 208 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 LGALS7P47929 136 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 OR1L4Q8NGR5 311 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 GTSF1LQ9H1H1 148 aa14.08□□□□□ -0.16
SQSTM1-202ENST00000389805 APELAP0DMC3 54 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 GRNP28799 593 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 ERHP84090 104 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 SAMD13Q5VXD3 122 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 FA2HQ7L5A8 372 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 OSR1Q8TAX0 266 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 NDUFA4L2Q9NRX3 87 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 ANKHD1Q8IWZ3 2542 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 C19orf71A6NCJ1 209 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 CGB1A6NKQ9 187 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 MYCNOSP40205 109 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 AKAP6Q13023 2319 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 IGKV1D-37A0A075B6S9 117 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 FSTL3O95633 263 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 ARMS2P0C7Q2 107 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 WT1-ASQ06250 92 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
SQSTM1-202ENST00000389805 ASH1LQ9NR48 2969 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 RBPJQ06330 500 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 PRNTQ86SH4 94 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 COL6A6A6NMZ7 2263 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 TCRBV4S1A1TA0A5B7 111 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 K7ENP7 123 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 SLC25A17O43808 307 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 Q5PR19 223 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 NEGR1Q7Z3B1 354 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 NPFFR1Q9GZQ6 430 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 SPTBN4Q9H254 2564 aa14.06□□□□□ -0.16
SQSTM1-202ENST00000389805 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 ENSAO43768 121 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 IFI27P40305 119 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 NMUP48645 174 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 SMAGPQ0VAQ4 97 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 TMEM30BQ3MIR4 351 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 WFDC3Q8IUB2 231 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 CACNG7P62955 275 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 PCP2Q8IVA1 136 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 OR4C13Q8NGP0 309 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 VSTM2AQ8TAG5 236 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 CACNG8Q8WXS5 425 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 CHD8Q9HCK8 2581 aa14.05□□□□□ -0.16
SQSTM1-202ENST00000389805 ARHGAP32A7KAX9 2087 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 A1L4Q6 167 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 VSTM5A8MXK1 200 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 IGLV2-23P01705 113 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 TCRAP04437 139 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 CSN1S1P47710 185 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 DLX6P56179 175 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 SRSF12Q8WXF0 261 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 Q9H3A6 140 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 KLF12Q9Y4X4 402 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 TEX48A0A1B0GUV7 120 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 FAM90A27PA6NNH2 459 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 LTAP01374 205 aa14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 SOX21Q9Y651 276 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-202ENST00000389805 A0A1W2PPM0 123 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 IGHV1-8P0DP01 117 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 HCP5Q6MZN7 132 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 MED13LQ71F56 2210 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 SERTM2A0A1B0GWG4 89 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 PPIAL4GP0DN37 164 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 CNTFRP26992 372 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 EXOC3-AS1Q8N2X6 119 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 CLUHP3Q96NS8 147 aa14.03□□□□□ -0.16
SQSTM1-202ENST00000389805 PPIAL4CA0A0B4J2A2 164 aa14.02□□□□□ -0.16
SQSTM1-202ENST00000389805 AZU1P20160 251 aa14.02□□□□□ -0.16
SQSTM1-202ENST00000389805 TMEM155Q4W5P6 130 aa14.02□□□□□ -0.16
SQSTM1-202ENST00000389805 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.16
SQSTM1-202ENST00000389805 NCOR2Q9Y618 2525 aa14.02□□□□□ -0.16
SQSTM1-202ENST00000389805 K7EMI3 77 aa14.02□□□□□ -0.17
SQSTM1-202ENST00000389805 LY6HO94772 140 aa14.02□□□□□ -0.17
SQSTM1-202ENST00000389805 TMEM167AQ8TBQ9 72 aa14.02□□□□□ -0.17
SQSTM1-202ENST00000389805 NGBQ9NPG2 151 aa14.02□□□□□ -0.17
SQSTM1-202ENST00000389805 INSIG2Q9Y5U4 225 aa14.02□□□□□ -0.17
SQSTM1-202ENST00000389805 C22orf46C9J442 243 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 APOBEC3AP31941 199 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 CDSNQ15517 529 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 CT83Q5H943 113 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 FMC1Q96HJ9 113 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 A0A096LNJ9 63 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 A0A1B0GUT8 65 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 HAX1O00165 279 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 SMAD7O15105 426 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 BOD1L2Q8IYS8 172 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 TTTY13Q9BZ97 58 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 HSD52Q0P140 79 aa14.01□□□□□ -0.17
SQSTM1-202ENST00000389805 ZNF492Q9P255 531 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms