RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 J3KRW8 73 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 FXYD7P58549 80 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 CHAC1Q9BUX1 264 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 TM2D2Q9BX73 214 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 IGKV2D-26A0A0A0MRZ7 120 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 IGKV1-16P04430 117 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 IGHV1-2P23083 117 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 PAX8Q06710 450 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 Q71RC1 249 aaPredicted RBP11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 Q86TA4 180 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 PRO0461Q9UI25 63 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 TANC2Q9HCD6 1990 aa11.69□□□□□ -0.54
VPS9D1-201ENST00000389386 IGKV1D-17A0A075B6S4 117 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 OR11H12B2RN74 326 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 IGHV3-48P01763 117 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 RBMXL3Q8N7X1 1067 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 ZNF418Q8TF45 676 aaPredicted RBP11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 FZR1Q9UM11 496 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 A0A1B0GW15 77 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 HBDP02042 147 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 CGB3P0DN86 165 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 CGB7P0DN87 165 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 ZNF502Q8TBZ5 544 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 TTTY13Q9BZ97 58 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 Q9H3A6 140 aa11.68□□□□□ -0.54
VPS9D1-201ENST00000389386 C16orf97H3BN30 126 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 NDUFS7O75251 213 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 THAP8Q8NA92 274 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 MRPL36Q9P0J6 103 aaKnown RBP11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 U3KQK5 164 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 TPRP12270 2363 aaKnown RBP11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 D6R8Y8 96 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 H3BTX0 84 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 BRI3O95415 125 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 ORM2P19652 201 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 CEND1Q8N111 149 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 NDUFA4L2Q9NRX3 87 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 LINC00312Q9Y6C7 94 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 ADGRG4Q8IZF6 3080 aa11.67□□□□□ -0.54
VPS9D1-201ENST00000389386 IGLV2-11P01706 119 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 ERHP84090 104 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 C17orf58Q2M2W7 97 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 C8orf86Q6ZUL3 223 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 BSNQ9UPA5 3926 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 K7EMI3 77 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 SAA1P0DJI8 122 aaPredicted RBP11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 FLYWCH2Q96CP2 140 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 GP9P14770 177 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 PRNTQ86SH4 94 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 C9orf106Q8NAJ2 232 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 PRELID3AQ96N28 172 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 CDIP1Q9H305 208 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 HHLA3Q9XRX5 114 aa11.66□□□□□ -0.54
VPS9D1-201ENST00000389386 hADV38S2A0JD32 116 aa11.65□□□□□ -0.54
VPS9D1-201ENST00000389386 E7EUB6 86 aa11.65□□□□□ -0.54
VPS9D1-201ENST00000389386 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
VPS9D1-201ENST00000389386 ZNRF1Q8ND25 227 aa11.65□□□□□ -0.54
VPS9D1-201ENST00000389386 RITA1Q96K30 269 aa11.65□□□□□ -0.54
VPS9D1-201ENST00000389386 PLCE1Q9P212 2302 aa11.65□□□□□ -0.54
VPS9D1-201ENST00000389386 ZCCHC24Q8N2G6 241 aaKnown RBP11.65□□□□□ -0.55
VPS9D1-201ENST00000389386 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.55
VPS9D1-201ENST00000389386 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.55
VPS9D1-201ENST00000389386 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.55
VPS9D1-201ENST00000389386 NAV3Q8IVL0 2385 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 CLEC3BP05452 202 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 SRSF1Q07955 248 aaKnown RBP eCLIP11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 SPTA1P02549 2419 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 INS-IGF2F8WCM5 200 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 ZNF562Q6V9R5 426 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
VPS9D1-201ENST00000389386 TLN1Q9Y490 2541 aaKnown RBP11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 TIMM8AO60220 97 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 IGHV3OR15-7A0A075B7D8 119 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 HOXB4P17483 251 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 WT1-ASQ06250 92 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
VPS9D1-201ENST00000389386 ORMDL3Q8N138 153 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms