RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 NBR2O15453 112 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 PPBPP02775 128 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 GFRA4Q9GZZ7 299 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 BRWD1-AS2P59051 145 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 TP53TG3Q9ULZ0 132 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 SIGLEC9Q9Y336 463 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 LOC105371242A0A075B767 164 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 MTURNQ8N3F0 131 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 ZNF492Q9P255 531 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 CNTFRP26992 372 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 PSMG4Q5JS54 123 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 ZNF474Q6S9Z5 364 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 DEFB104AQ8WTQ1 72 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 JMJD8Q96S16 334 aa10.58□□□□□ -0.72
TRAPPC9-201ENST00000389328 IGKV1OR2-108A0A075B7D4 117 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 LGALS3P17931 250 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 CT83Q5H943 113 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 LCNL1Q6ZST4 164 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 DEFB125Q8N687 156 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 CLEC19AQ6UXS0 136 aa10.57□□□□□ -0.72
TRAPPC9-201ENST00000389328 IGHV1-3A0A0C4DH29 117 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 CD59P13987 128 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 APOBEC3AP31941 199 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 TP73-AS1Q9UF72 201 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 B9A039 149 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 ADAMTSL5Q6ZMM2 481 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 TMEM158Q8WZ71 300 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 H3BRM9 83 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 TMEM178BH3BS89 294 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 CCL21O00585 134 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 KLF5Q13887 457 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 SPRNQ5BIV9 151 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 C8orf49Q96NF6 230 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 CYSLTR1Q9Y271 337 aa10.56□□□□□ -0.72
TRAPPC9-201ENST00000389328 P0C879 139 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 COL8A2P25067 703 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 RAB9AP51151 201 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 SAP30O75446 220 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 CUL9Q8IWT3 2517 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 PROP1O75360 226 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 KIR2DL4Q99706 377 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 EML6Q6ZMW3 1958 aa10.55□□□□□ -0.72
TRAPPC9-201ENST00000389328 PF4V1P10720 104 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 PCNX2A6NKB5 2137 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 HAX1O00165 279 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 IGHG3P01860 377 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 IGF2BP2-AS1Q96M15 143 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 IGHV3OR16-10A0A075B7F0 116 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 RHOGP84095 191 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 POU2AF1Q16633 256 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 TTC32Q5I0X7 151 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 FAM57AQ8TBR7 257 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 TMEM131Q92545 1883 aa10.54□□□□□ -0.72
TRAPPC9-201ENST00000389328 CD300EQ496F6 205 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 GLMPQ8WWB7 406 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 TRAV40A0A0B4J280 105 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 ETDBQ3ZM63 59 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 PATE2Q6UY27 113 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 KMT2EQ8IZD2 1858 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 DAZAP2Q15038 168 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 ZNF833PQ6ZTB9 187 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
TRAPPC9-201ENST00000389328 K7EP34 96 aa10.52□□□□□ -0.72
TRAPPC9-201ENST00000389328 TAX1BP3O14907 124 aa10.52□□□□□ -0.72
TRAPPC9-201ENST00000389328 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.72
TRAPPC9-201ENST00000389328 C17orf77Q96MU5 243 aa10.52□□□□□ -0.72
TRAPPC9-201ENST00000389328 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.72
TRAPPC9-201ENST00000389328 PLXNB1O43157 2135 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 NDUFB8O95169 186 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 ASIPP42127 132 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 K7ERJ3 54 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 ATP5G2Q06055 141 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 MRPL51Q4U2R6 128 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 DPF1Q92782 380 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 EEF1AKMT3Q96AZ1 226 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 LAGE3Q14657 143 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 CACNA1AO00555 2505 aa10.52□□□□□ -0.73
TRAPPC9-201ENST00000389328 ADIPOQQ15848 244 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 ZNF56Q15929 161 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 FAM120AOSQ5T036 256 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 PCP2Q8IVA1 136 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
TRAPPC9-201ENST00000389328 DDB2Q92466 427 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms