RNA–Protein interactions for RNA: ENST00000383898.1

RNU6-1-201, Transcript of RNA, U6 small nuclear 1, humanhuman

BASIC

Gene RNU6-1, Length 107 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1-201ENST00000383898 CST9LQ9H4G1 147 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 C14orf105Q9NVL8 296 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 MED9Q9NWA0 146 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 CD300AQ9UGN4 299 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 CFAP45Q9UL16 551 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 TIMM9Q9Y5J7 89 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 TANC2Q9HCD6 1990 aa0.74□□□□□ -2.29
RNU6-1-201ENST00000383898 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 TRAV10A0A0B4J240 114 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 IGKV3D-7A0A0C4DH55 119 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 IGKV3OR2-268A0A0C4DH90 116 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 TRBV6-5A0A0K0K1A5 114 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 HMSDA8MTL9 139 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 C9JCJ5 164 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 SMLR1H3BR10 107 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 HCRTO43612 131 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 CREBL2O60519 120 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 MRPS14O60783 128 aaKnown RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 PGLYRP1O75594 196 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 KRT75O95678 551 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 IL6P05231 212 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 HLA-DQB2P05538 268 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 OCMP0CE72 109 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 GPX2P18283 190 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 CCR7P32248 378 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 EVX1P49640 407 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 TMED1Q13445 227 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 NNATQ16517 81 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 DEFB110Q30KQ9 67 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 TMEM155Q4W5P6 130 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 C22orf39Q6P5X5 142 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 SBSNQ6UWP8 590 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 UNQ6190/PRO20217Q6UXQ8 127 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 LINC00322Q6ZN03 302 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 FAM19A5Q7Z5A7 132 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 C1orf158Q8N1D5 194 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 LRRC25Q8N386 305 aaPredicted RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 OR51T1Q8NGJ9 327 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 OR1L8Q8NGR8 309 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 JOSD2Q8TAC2 188 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 MBD3L1Q8WWY6 194 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 ANKRD36BP1Q96IX9 119 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 NMNAT3Q96T66 252 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 DCUN1D5Q9BTE7 237 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 NSRP1Q9H0G5 558 aaKnown RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 SPACA1Q9HBV2 294 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 XAGE1AQ9HD64 81 aa0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 ZNHIT6Q9NWK9 470 aaKnown RBP0.73□□□□□ -2.29
RNU6-1-201ENST00000383898 DOCK4Q8N1I0 1966 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 IGHV1-18A0A0C4DH31 117 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 A6NN06 94 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 CLDN25C9JDP6 229 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 H3BUX3 64 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 SLC16A4O15374 487 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 HPGDSO60760 199 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 ZNF737O75373 536 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 ADAP1O75689 374 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 C1QAP02745 245 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 CXCL2P19875 107 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 CD40LGP29965 261 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 CDK9P50750 372 aaKnown RBP0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 MAP3K7CLP57077 242 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 OR4D2P58180 307 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 COX6B2Q6YFQ2 88 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 ZNF705AQ6ZN79 300 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 OR7G1Q8NGA0 311 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 OR4C12Q96R67 309 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 CCL13Q99616 98 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 TMEM109Q9BVC6 243 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 MS4A6AQ9H2W1 248 aa0.72□□□□□ -2.29
RNU6-1-201ENST00000383898 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 IGKV3-7A0A075B6H7 116 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 H0Y980 276 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 H7C2G1 150 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 ATP8B1O43520 1251 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 OR2J2O76002 312 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 APOMO95445 188 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 CRPP02741 224 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 RPSAP08865 295 aaKnown RBP0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 CXCL3P19876 107 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 CXCR4P61073 352 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 ELOBQ15370 118 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 SLC36A2Q495M3 483 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 TNFAIP8L2Q6P589 184 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 DCXRQ7Z4W1 244 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 GPHB5Q86YW7 130 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 Q8N402 240 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 LCN9Q8WX39 176 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 SMIM19Q96E16 107 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 ARL5BQ96KC2 179 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 Q96M85 177 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 TTTY13Q9BZ97 58 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 RNF122Q9H9V4 155 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 ANGPT4Q9Y264 503 aa0.71□□□□□ -2.3
RNU6-1-201ENST00000383898 DSPPQ9NZW4 1301 aa0.7□□□□□ -2.3
RNU6-1-201ENST00000383898 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
RNU6-1-201ENST00000383898 TRAV7A0A075B6U4 112 aa0.7□□□□□ -2.3
RNU6-1-201ENST00000383898 A0A087WTM6 91 aa0.7□□□□□ -2.3
RNU6-1-201ENST00000383898 DEFB131BA0A096LNP1 70 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms