RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MPV17L2Q567V2 206 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 RNF138Q8WVD3 245 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 BPESC1Q9GZL8 116 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 FAM215AQ9Y5M1 114 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 F2Z2F3 143 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 ARMS2P0C7Q2 107 aa13.84□□□□□ -0.19
SGCB-201ENST00000381431 SORL1Q92673 2214 aa13.83□□□□□ -0.19
SGCB-201ENST00000381431 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.19
SGCB-201ENST00000381431 FNDC10F2Z333 226 aa13.83□□□□□ -0.19
SGCB-201ENST00000381431 SH2D1AO60880 128 aa13.83□□□□□ -0.19
SGCB-201ENST00000381431 ZNF688P0C7X2 276 aa13.83□□□□□ -0.19
SGCB-201ENST00000381431 NUTF2P61970 127 aaKnown RBP13.83□□□□□ -0.19
SGCB-201ENST00000381431 BEND2Q8NDZ0 799 aa13.83□□□□□ -0.19
SGCB-201ENST00000381431 IGLV1-44P01699 117 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 GATA4P43694 442 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 C5orf30Q96GV9 206 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 PAX1P15863 534 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 WT1P19544 449 aaPredicted RBP13.83□□□□□ -0.2
SGCB-201ENST00000381431 ZNF124Q15973 351 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 SPOCK3Q9BQ16 436 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 PLA2G2EQ9NZK7 142 aa13.83□□□□□ -0.2
SGCB-201ENST00000381431 A0A087X0K7 114 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 EREGO14944 169 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 PRTN3P24158 256 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 LOXP28300 417 aaPredicted RBP13.82□□□□□ -0.2
SGCB-201ENST00000381431 EMP1P54849 157 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 PSG3Q16557 428 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 MEGF9Q9H1U4 602 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 EML6Q6ZMW3 1958 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 COL4A3Q01955 1670 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 TOMM40O96008 361 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 RASL11AQ6T310 242 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 MOB4Q9Y3A3 225 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 IGLV3-9A0A075B6K5 115 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 CD300EQ496F6 205 aaPredicted RBP13.82□□□□□ -0.2
SGCB-201ENST00000381431 GTSCR1Q86UQ5 136 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 ORAOV1Q8WV07 137 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
SGCB-201ENST00000381431 SYS1-DBNDD2H3BUS1 97 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 RNASE1P07998 156 aaKnown RBP13.81□□□□□ -0.2
SGCB-201ENST00000381431 PLA2G2CQ5R387 149 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 TOMM7Q9P0U1 55 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 SAA4P35542 130 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 GUSBP1Q15486 140 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 Q86TA4 180 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 NACAE9PAV3 2078 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 CFHR2P36980 270 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 OR4X2Q8NGF9 303 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 VCX2Q9H322 139 aa13.81□□□□□ -0.2
SGCB-201ENST00000381431 TMEM262E9PQX1 116 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 GNLYP22749 145 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 OR2K2Q8NGT1 345 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 A8MWP6 167 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 C11orf53Q8IXP5 236 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 C18orf32Q8TCD1 76 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 PRSS22Q9GZN4 317 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 POLR3KQ9Y2Y1 108 aaPredicted RBP13.8□□□□□ -0.2
SGCB-201ENST00000381431 DNAH12Q6ZR08 3092 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 OOSP1A8MZH6 123 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 MRPL27Q9P0M9 148 aaKnown RBP13.8□□□□□ -0.2
SGCB-201ENST00000381431 IGKCP01834 107 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 SHANK2-AS3Q9BTD1 123 aa13.8□□□□□ -0.2
SGCB-201ENST00000381431 KIF26AQ9ULI4 1882 aaPredicted RBP13.79□□□□□ -0.2
SGCB-201ENST00000381431 PF4P02776 101 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 CEACAM8P31997 349 aaPredicted RBP13.79□□□□□ -0.2
SGCB-201ENST00000381431 M0R1W7 72 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 DLEU1O43261 78 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 ERCC8Q13216 396 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 TMEM249Q2WGJ8 235 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 OR13C6PQ8NH95 151 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 KIAA1671Q9BY89 1806 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 ZNF562Q6V9R5 426 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 NAV2Q8IVL1 2488 aa13.79□□□□□ -0.2
SGCB-201ENST00000381431 IFI27P40305 119 aaPredicted RBP13.78□□□□□ -0.2
SGCB-201ENST00000381431 ORMDL2Q53FV1 153 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 LYPD6BQ8NI32 183 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 MED12LQ86YW9 2145 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 HIVEP3Q5T1R4 2406 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 IGHV3-64A0A075B6Q5 118 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 NDUFB8O95169 186 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 CEP295Q9C0D2 2601 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 TMEM213A2RRL7 107 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 FCN3O75636 299 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
SGCB-201ENST00000381431 TRGV2A0A075B6R0 118 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 A0A0U1RRA0 63 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 OVOL1O14753 267 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 Q0VG73 95 aa13.78□□□□□ -0.2
SGCB-201ENST00000381431 CHD3Q12873 2000 aaKnown RBP13.78□□□□□ -0.2
SGCB-201ENST00000381431 ZNF815PA8K554 130 aa13.77□□□□□ -0.2
SGCB-201ENST00000381431 SLAQ13239 276 aa13.77□□□□□ -0.2
SGCB-201ENST00000381431 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.2
SGCB-201ENST00000381431 G3V318 75 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 LYPD1Q8N2G4 141 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 TEX29Q8N6K0 151 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 Q8TCH9 128 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms