RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 DKK2Q9UBU2 259 aa9.3□□□□□ -0.92
RPAIN-202ENST00000381208 H3BP45 60 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 FXYD7P58549 80 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 PLP1P60201 277 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 FCN2Q15485 313 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 CYP2G1PQ6ZSU1 146 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 SMIM8Q96KF7 97 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 SLC35B3Q9H1N7 401 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 PSENENQ9NZ42 101 aa9.29□□□□□ -0.92
RPAIN-202ENST00000381208 SMCO3A2RU48 225 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 HYPMO75409 117 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 EMP1P54849 157 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 TAS2R30P59541 319 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 DEFB1P60022 68 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 POLR2GP62487 172 aaKnown RBP eCLIP9.28□□□□□ -0.92
RPAIN-202ENST00000381208 DLK1P80370 383 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 PXDC1Q5TGL8 231 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 SHANK2-AS3Q9BTD1 123 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 TMEM208Q9BTX3 173 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 SLC25A39Q9BZJ4 359 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-202ENST00000381208 NPVFQ9HCQ7 196 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
RPAIN-202ENST00000381208 LOC102723971A0A1B0GUV8 181 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 F6UB75 175 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 H3BRN7 92 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 ADAP1O75689 374 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 FAM222AQ5U5X8 452 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 ZNF767PQ75MW2 155 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 OR11H7Q8NGC8 314 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 OR10P1Q8NGE3 313 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
RPAIN-202ENST00000381208 K7EPK0 472 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 SSSCA1O60232 199 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 TSC22D2O75157 780 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 INSP01308 110 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 LINC00869P0C866 280 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 GATA2P23769 480 aaPredicted RBP9.26□□□□□ -0.93
RPAIN-202ENST00000381208 TEPPQ6URK8 271 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 TMEM14EPQ6UXP3 125 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 C20orf173Q96LM9 149 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 GGACTQ9BVM4 153 aa9.26□□□□□ -0.93
RPAIN-202ENST00000381208 YTHDF2Q9Y5A9 579 aaKnown RBP9.26□□□□□ -0.93
RPAIN-202ENST00000381208 PMS2P5A8MQ11 134 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 RGS13O14921 159 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-202ENST00000381208 TSPOP30536 169 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 CNN1P51911 297 aaKnown RBP9.25□□□□□ -0.93
RPAIN-202ENST00000381208 NKX2-5P52952 324 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-202ENST00000381208 FGL1Q08830 312 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 IAH1Q2TAA2 248 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-202ENST00000381208 LGALS9BQ3B8N2 356 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 TMEM182Q6ZP80 229 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-202ENST00000381208 ZNF431Q8TF32 576 aaPredicted RBP9.25□□□□□ -0.93
RPAIN-202ENST00000381208 SEC22CQ9BRL7 303 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 SCRT1Q9BWW7 348 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 HECTD4Q9Y4D8 3996 aa9.25□□□□□ -0.93
RPAIN-202ENST00000381208 A0A087X0K7 114 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 OR5G3P0C626 314 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 CXCL2P19875 107 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 DAD1P61803 113 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 NDUFA5Q16718 116 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 RNF212Q495C1 297 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 CFAP161Q6P656 301 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 ZNF546Q86UE3 836 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 UBE2DNLQ8IWF7 75 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 TMEM256Q8N2U0 113 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 C15orf53Q8NAA6 179 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 ZNF738Q8NE65 137 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 LRRC20Q8TCA0 184 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 MITD1Q8WV92 249 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 TRAV8-2A0A0B4J237 113 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 SCGB1D2O95969 90 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 GHRHP01286 108 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 METTL15P1P0C7V9 234 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 CXCL3P19876 107 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 FAM3BP58499 235 aaPredicted RBP9.24□□□□□ -0.93
RPAIN-202ENST00000381208 ARL6Q9H0F7 186 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 PPP1R14DQ9NXH3 145 aa9.24□□□□□ -0.93
RPAIN-202ENST00000381208 GOSR2O14653 212 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 RAB31Q13636 194 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 PSG3Q16557 428 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 SPINK13Q1W4C9 94 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 LCN15Q6UWW0 184 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 GSG1LQ6UXU4 331 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 C12orf45Q8N5I9 185 aaPredicted RBP9.23□□□□□ -0.93
RPAIN-202ENST00000381208 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 ARV1Q9H2C2 271 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 GSKIPQ9P0R6 139 aa9.23□□□□□ -0.93
RPAIN-202ENST00000381208 L7N2F9 121 aa9.22□□□□□ -0.93
RPAIN-202ENST00000381208 RHOBP62745 196 aa9.22□□□□□ -0.93
RPAIN-202ENST00000381208 VAMP2P63027 116 aa9.22□□□□□ -0.93
RPAIN-202ENST00000381208 SOHLH1Q5JUK2 328 aa9.22□□□□□ -0.93
RPAIN-202ENST00000381208 OR2T35Q8NGX2 323 aa9.22□□□□□ -0.93
RPAIN-202ENST00000381208 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 842.2 ms