RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.77
DNMT3A-204ENST00000380756 TEX29Q8N6K0 151 aa10.27□□□□□ -0.77
DNMT3A-204ENST00000380756 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.77
DNMT3A-204ENST00000380756 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 K7EN84 100 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 FXYD7P58549 80 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 KLRD1Q13241 179 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 C15orf32Q32M92 178 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 TMEM155Q4W5P6 130 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 CRIP3Q6Q6R5 217 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 SLC25A2Q9BXI2 301 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 DENND4AQ7Z401 1863 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 A0A1B0GWB2 263 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 Q8TCH9 128 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 GFRA4Q9GZZ7 299 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 FAM231BA6NCW3 169 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 SNRPD3P62318 126 aaKnown RBP10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 CT83Q5H943 113 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 ZNF492Q9P255 531 aa10.26□□□□□ -0.77
DNMT3A-204ENST00000380756 A0A0G2JLM5 398 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 THBDP07204 575 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 NAA38Q9BRA0 125 aaKnown RBP10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 SELENOKQ9Y6D0 94 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 SH2D1AO60880 128 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 CEACAM4O75871 244 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 TEX43Q6ZNM6 134 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 SHANK2-AS3Q9BTD1 123 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 MEGF9Q9H1U4 602 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 SRSF1Q07955 248 aaKnown RBP eCLIP10.25□□□□□ -0.778e-8■■■■□ 19.5
DNMT3A-204ENST00000380756 APOMO95445 188 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 IGKCP01834 107 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 DDB2Q92466 427 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 COX11Q9Y6N1 276 aa10.25□□□□□ -0.77
DNMT3A-204ENST00000380756 CEP350Q5VT06 3117 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 J3QKU1 62 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 Q6ZPA2 131 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 RCHY1Q96PM5 261 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 EML6Q6ZMW3 1958 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 SNCGO76070 127 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 VMO1Q7Z5L0 202 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 NPSP0C0P6 89 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 SPOCK3Q9BQ16 436 aa10.24□□□□□ -0.77
DNMT3A-204ENST00000380756 TRAV21A0A0B4J279 112 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 E7EQL1 145 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 LY6HO94772 140 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 CNTFRP26992 372 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 C3orf36Q3SXR2 165 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 PLA2G2CQ5R387 149 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 ASPHD1Q5U4P2 390 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 IGLL1P15814 213 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 COL8A2P25067 703 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 LOXP28300 417 aaPredicted RBP10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 IGFL4Q6B9Z1 124 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 TPSG1Q9NRR2 321 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 IGLV2-14P01704 120 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
DNMT3A-204ENST00000380756 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 NUPR1O60356 82 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 PDE6HQ13956 83 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 TEX36Q5VZQ5 186 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 KIR2DL5AQ8N109 375 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 FXYD5Q96DB9 178 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 SRSF8Q9BRL6 282 aaKnown RBP10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 SMPXQ9UHP9 88 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 TECTAO75443 2155 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 LINC00311Q8N616 119 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 ADAMTS9Q9P2N4 1935 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 TMEM131Q92545 1883 aa10.22□□□□□ -0.77
DNMT3A-204ENST00000380756 CD5LO43866 347 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 PAX8Q06710 450 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 DIAPH2-AS1Q14236 149 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 GTSCR1Q86UQ5 136 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 BCL6BQ8N143 479 aaPredicted RBP10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 FAM168AQ92567 244 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 PAX1P15863 534 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 FAM215AQ9Y5M1 114 aa10.21□□□□□ -0.77
DNMT3A-204ENST00000380756 TRBV19A0A075B6N1 114 aa10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 CEACAM8P31997 349 aaPredicted RBP10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 SAMD5Q5TGI4 173 aa10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 MINOS1Q5TGZ0 78 aa10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 C7orf69Q9H7B7 122 aa10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 GEMIN7Q9H840 131 aaKnown RBP10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 BEX4Q9NWD9 120 aaPredicted RBP10.21□□□□□ -0.78
DNMT3A-204ENST00000380756 MINOS1-NBL1R4GNA1 71 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms