RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PSPNO60542 156 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 CLPSP04118 112 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 C5orf64Q2M2E5 130 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 TMEM178BH3BS89 294 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 CDK2AP2O75956 126 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 VWCEQ96DN2 955 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 TRGV4A0A0C4DH28 118 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 PRTN3P24158 256 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 H3BMM0 161 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 ATP1A1-AS1Q5TC04 95 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 UBE2WQ96B02 151 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 JPT2Q9H910 190 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 SPRR3Q9UBC9 169 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 NTN3O00634 580 aaPredicted RBP7.82□□□□□ -1.16
SNX1-202ENST00000380285 SIGLEC9Q9Y336 463 aa7.82□□□□□ -1.16
SNX1-202ENST00000380285 K7EP34 96 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 NCR2O95944 276 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 FGFBP3Q8TAT2 258 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 CSTL1Q9H114 145 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 ZDBF2Q9HCK1 2354 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 UTF1Q5T230 341 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 K7EMI3 77 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 EFNA2O43921 213 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 LINC00473A8K010 186 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 LMO1P25800 156 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 TRPT1Q86TN4 253 aaKnown RBP7.81□□□□□ -1.16
SNX1-202ENST00000380285 CD177Q8N6Q3 437 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 Q8N8P6 123 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 IL17RELQ6ZVW7 336 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 TNRC6AQ8NDV7 1962 aaKnown RBP7.81□□□□□ -1.16
SNX1-202ENST00000380285 EPOPA6NHQ4 379 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 FAM104BQ5XKR9 115 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 RCHY1Q96PM5 261 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 TMEM14CQ9P0S9 112 aa7.81□□□□□ -1.16
SNX1-202ENST00000380285 ERCC8Q13216 396 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 VWC2LB2RUY7 222 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 BUB1B-PAK6H3BSN5 160 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 PPIFP30405 207 aaKnown RBP7.8□□□□□ -1.16
SNX1-202ENST00000380285 SLAQ13239 276 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 ZNF876PQ49A33 203 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 SELLP14151 372 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 EDA2RQ9HAV5 297 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 ETV2O00321 342 aaPredicted RBP7.8□□□□□ -1.16
SNX1-202ENST00000380285 LYPD6BQ8NI32 183 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 C1QTNF4Q9BXJ3 329 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 RHODO00212 210 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SNX1-202ENST00000380285 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
SNX1-202ENST00000380285 K7EP13 123 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 C9JAW5 83 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 PAX4O43316 350 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 GLMPQ8WWB7 406 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 CHCHD5Q9BSY4 110 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 SPTBN2O15020 2390 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 SRRM4A7MD48 611 aaKnown RBP7.79□□□□□ -1.16
SNX1-202ENST00000380285 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
SNX1-202ENST00000380285 AMN1Q8IY45 258 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 IGHV3-11P01762 117 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 CDKN1AP38936 164 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 VMO1Q7Z5L0 202 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 IGKV3D-20A0A0C4DH25 116 aa7.79□□□□□ -1.16
SNX1-202ENST00000380285 IGHV3OR16-8A0A075B7F1 116 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 TRAV3A0A0B4J244 114 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 WIPF2Q8TF74 440 aaPredicted RBP7.78□□□□□ -1.16
SNX1-202ENST00000380285 GAFA1Q96PS6 74 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 RSPO3Q9BXY4 272 aaPredicted RBP7.78□□□□□ -1.16
SNX1-202ENST00000380285 LSM4Q9Y4Z0 139 aaKnown RBP7.78□□□□□ -1.16
SNX1-202ENST00000380285 C9JQL5 133 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 RPL15P61313 204 aaKnown RBP7.78□□□□□ -1.16
SNX1-202ENST00000380285 V9GYV3 84 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 LILRA1O75019 489 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.78□□□□□ -1.16
SNX1-202ENST00000380285 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.78□□□□□ -1.16
SNX1-202ENST00000380285 PMVKQ15126 192 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 INSP01308 110 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 FHL1Q13642 323 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 Q6ZRM9 215 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 IGHV3OR16-10A0A075B7F0 116 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 ATP6V0BQ99437 205 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 IFITM1P13164 125 aa7.78□□□□□ -1.16
SNX1-202ENST00000380285 Q6ZWC4 215 aa7.77□□□□□ -1.16
SNX1-202ENST00000380285 BMPERQ8N8U9 685 aa7.77□□□□□ -1.16
SNX1-202ENST00000380285 EML6Q6ZMW3 1958 aa7.77□□□□□ -1.17
SNX1-202ENST00000380285 SOCS3O14543 225 aa7.77□□□□□ -1.17
SNX1-202ENST00000380285 COA6Q5JTJ3 125 aaKnown RBP7.77□□□□□ -1.17
SNX1-202ENST00000380285 KLF2Q9Y5W3 355 aaPredicted RBP7.77□□□□□ -1.17
SNX1-202ENST00000380285 A0A0G2JRQ6 117 aa7.77□□□□□ -1.17
SNX1-202ENST00000380285 NDUFA4L2Q9NRX3 87 aa7.77□□□□□ -1.17
SNX1-202ENST00000380285 ZNF474Q6S9Z5 364 aaPredicted RBP7.77□□□□□ -1.17
SNX1-202ENST00000380285 CSRP1P21291 193 aaKnown RBP7.77□□□□□ -1.17
SNX1-202ENST00000380285 GATA4P43694 442 aa7.77□□□□□ -1.17
SNX1-202ENST00000380285 VGLL1Q99990 258 aa7.77□□□□□ -1.17
SNX1-202ENST00000380285 ARMS2P0C7Q2 107 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 380.8 ms