RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PSENENQ9NZ42 101 aa16.15■□□□□ 0.18
U2AF1-202ENST00000380276 CXCL3P19876 107 aa16.14■□□□□ 0.17
U2AF1-202ENST00000380276 TMBIM6P55061 237 aa16.14■□□□□ 0.17
U2AF1-202ENST00000380276 POLR2GP62487 172 aaKnown RBP eCLIP16.14■□□□□ 0.17
U2AF1-202ENST00000380276 S100A7AQ86SG5 101 aa16.14■□□□□ 0.17
U2AF1-202ENST00000380276 TRIM63Q969Q1 353 aa16.14■□□□□ 0.17
U2AF1-202ENST00000380276 CDKN1BP46527 198 aa16.13■□□□□ 0.17
U2AF1-202ENST00000380276 SPATA12Q7Z6I5 190 aa16.13■□□□□ 0.17
U2AF1-202ENST00000380276 RPUSD4Q96CM3 377 aaKnown RBP16.13■□□□□ 0.17
U2AF1-202ENST00000380276 BCL7BQ9BQE9 202 aa16.13■□□□□ 0.17
U2AF1-202ENST00000380276 ARL6Q9H0F7 186 aa16.13■□□□□ 0.17
U2AF1-202ENST00000380276 SSSCA1O60232 199 aa16.12■□□□□ 0.17
U2AF1-202ENST00000380276 ADAP1O75689 374 aa16.12■□□□□ 0.17
U2AF1-202ENST00000380276 OR10J6PQ8NGY7 276 aa16.12■□□□□ 0.17
U2AF1-202ENST00000380276 GNPNAT1Q96EK6 184 aaPredicted RBP16.12■□□□□ 0.17
U2AF1-202ENST00000380276 Q9H8V8 135 aa16.12■□□□□ 0.17
U2AF1-202ENST00000380276 A0A087X0K7 114 aa16.11■□□□□ 0.17
U2AF1-202ENST00000380276 SNRPCP09234 159 aaKnown RBP16.11■□□□□ 0.17
U2AF1-202ENST00000380276 SELENOTP62341 195 aa16.11■□□□□ 0.17
U2AF1-202ENST00000380276 TMEM263Q8WUH6 116 aaKnown RBP16.11■□□□□ 0.17
U2AF1-202ENST00000380276 TRAV26-1A0A087WT03 109 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 A0A0J9YY99 117 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 CCNKO75909 580 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 TTC32Q5I0X7 151 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 ZNF493Q6ZR52 646 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 CCDC28AQ8IWP9 274 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 MGAT4CQ9UBM8 478 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 LRP1BQ9NZR2 4599 aa16.1■□□□□ 0.17
U2AF1-202ENST00000380276 H3BMQ9 156 aa16.09■□□□□ 0.17
U2AF1-202ENST00000380276 SCGB1D2O95969 90 aa16.09■□□□□ 0.17
U2AF1-202ENST00000380276 PLP1P60201 277 aa16.09■□□□□ 0.17
U2AF1-202ENST00000380276 SLC38A11Q08AI6 406 aa16.09■□□□□ 0.17
U2AF1-202ENST00000380276 CCDC190Q86UF4 302 aa16.09■□□□□ 0.17
U2AF1-202ENST00000380276 RNASE8Q8TDE3 154 aaKnown RBP16.09■□□□□ 0.17
U2AF1-202ENST00000380276 PARD6GQ9BYG4 376 aaPredicted RBP16.09■□□□□ 0.17
U2AF1-202ENST00000380276 ARV1Q9H2C2 271 aa16.09■□□□□ 0.17
U2AF1-202ENST00000380276 GAGE12BA1L429 117 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 PMS2P5A8MQ11 134 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 H7BYZ3 331 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 J3KRW8 73 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 GAGE7O76087 117 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 METTL15P1P0C7V9 234 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 GAGE12FP0CL80 117 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 GAGE12GP0CL81 117 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 GAGE12IP0CL82 117 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 ID3Q02535 119 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 NPVFQ9HCQ7 196 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 RNF24Q9Y225 148 aa16.08■□□□□ 0.16
U2AF1-202ENST00000380276 M6PRP20645 277 aa16.07■□□□□ 0.16
U2AF1-202ENST00000380276 DLK1P80370 383 aa16.07■□□□□ 0.16
U2AF1-202ENST00000380276 SCRT2Q9NQ03 307 aa16.07■□□□□ 0.16
U2AF1-202ENST00000380276 C9orf170A2RU37 121 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 SNURFLB1AK76 121 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 RLN2P04090 185 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 KIR3DS1Q14943 382 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 TEPPQ6URK8 271 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 LCN15Q6UWW0 184 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 PATE2Q6UY27 113 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 OR10P1Q8NGE3 313 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 RXFP4Q8TDU9 374 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 SLC50A1Q9BRV3 221 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 V9GYH0 126 aa16.06■□□□□ 0.16
U2AF1-202ENST00000380276 H3BTX0 84 aa16.05■□□□□ 0.16
U2AF1-202ENST00000380276 GOSR2O14653 212 aa16.05■□□□□ 0.16
U2AF1-202ENST00000380276 CXCL2P19875 107 aa16.05■□□□□ 0.16
U2AF1-202ENST00000380276 LINC00305Q7Z4B0 112 aa16.05■□□□□ 0.16
U2AF1-202ENST00000380276 Q8N1X5 172 aa16.05■□□□□ 0.16
U2AF1-202ENST00000380276 ZNF331Q9NQX6 463 aaPredicted RBP16.05■□□□□ 0.16
U2AF1-202ENST00000380276 ZNF701M0R085 212 aaPredicted RBP16.04■□□□□ 0.16
U2AF1-202ENST00000380276 S100A5P33763 92 aa16.04■□□□□ 0.16
U2AF1-202ENST00000380276 INPP1P49441 399 aa16.04■□□□□ 0.16
U2AF1-202ENST00000380276 UBE2MP61081 183 aaKnown RBP16.04■□□□□ 0.16
U2AF1-202ENST00000380276 GFI1BQ5VTD9 330 aa16.04■□□□□ 0.16
U2AF1-202ENST00000380276 SMIM8Q96KF7 97 aa16.04■□□□□ 0.16
U2AF1-202ENST00000380276 C20orf144Q9BQM9 153 aa16.04■□□□□ 0.16
U2AF1-202ENST00000380276 KRTAP1-5Q9BYS1 174 aa16.04■□□□□ 0.16
U2AF1-202ENST00000380276 MRPS12O15235 138 aaKnown RBP16.03■□□□□ 0.16
U2AF1-202ENST00000380276 COX7A2P2O60397 106 aa16.03■□□□□ 0.16
U2AF1-202ENST00000380276 ZNF546Q86UE3 836 aa16.03■□□□□ 0.16
U2AF1-202ENST00000380276 BPIFA4PQ86YQ2 179 aa16.03■□□□□ 0.16
U2AF1-202ENST00000380276 DEDD2Q8WXF8 326 aa16.03■□□□□ 0.16
U2AF1-202ENST00000380276 HOXA5P20719 270 aa16.02■□□□□ 0.16
U2AF1-202ENST00000380276 ESRGQ1W209 222 aa16.02■□□□□ 0.16
U2AF1-202ENST00000380276 TMEM14EPQ6UXP3 125 aa16.02■□□□□ 0.16
U2AF1-202ENST00000380276 Q9H3A6 140 aa16.02■□□□□ 0.16
U2AF1-202ENST00000380276 ZNF586Q9NXT0 402 aa16.02■□□□□ 0.16
U2AF1-202ENST00000380276 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
U2AF1-202ENST00000380276 SLC17A3O00476 420 aa16.01■□□□□ 0.15
U2AF1-202ENST00000380276 AGPAT2O15120 278 aa16.01■□□□□ 0.15
U2AF1-202ENST00000380276 PXDC1Q5TGL8 231 aa16.01■□□□□ 0.15
U2AF1-202ENST00000380276 ZNF503Q96F45 646 aa16.01■□□□□ 0.15
U2AF1-202ENST00000380276 FLVCR2Q9UPI3 526 aa16.01■□□□□ 0.15
U2AF1-202ENST00000380276 TRAV12-3A0A0B4J271 114 aa16■□□□□ 0.15
U2AF1-202ENST00000380276 CCDC160A6NGH7 325 aa16■□□□□ 0.15
U2AF1-202ENST00000380276 FNDC10F2Z333 226 aa16■□□□□ 0.15
U2AF1-202ENST00000380276 K7EPK0 472 aa16■□□□□ 0.15
U2AF1-202ENST00000380276 KRTAP10-2P60368 255 aa16■□□□□ 0.15
U2AF1-202ENST00000380276 IAH1Q2TAA2 248 aaPredicted RBP16■□□□□ 0.15
U2AF1-202ENST00000380276 C4orf46Q504U0 113 aa16■□□□□ 0.15
U2AF1-202ENST00000380276 GSKIPQ9P0R6 139 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms